Oryza brachyantha (malo sina): 102704056
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Entry
102704056 CDS
T02995
Name
(RefSeq) DNA polymerase I A, chloroplastic
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102704056
03410 Base excision repair
102704056
03420 Nucleotide excision repair
102704056
03440 Homologous recombination
102704056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102704056
03400 DNA repair and recombination proteins [BR:
obr03400
]
102704056
Enzymes [BR:
obr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102704056
DNA replication proteins [BR:
obr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
102704056
DNA repair and recombination proteins [BR:
obr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
102704056
NER (nucleotide excision repair)
GGR (global genome repair) factors
102704056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
102704056
NCBI-ProteinID:
XP_040379204
LinkDB
All DBs
Position
4:19255955..19263419
Genome browser
AA seq
1044 aa
AA seq
DB search
MAAPAPAPAPAQLRRCPCSAPLWAAPPSPFRCRRRRGGGSLSSPFIGGGRQEYSHSSSGI
GVKDNSAFKIGVYNNFSVQSNAQEWIEESKRISSIKTRNSVGNTIYNGSTHLRAGVLHHE
PLEDYKSSKYSSLYSVRERMAPNSLANRHANMELTKHHLMNQAVSAVSALTSVVNDDIKP
LNKPSGSELKTQWPGGAKIDASVLKISKVETSLQFDDEVRDGSDGDLPECTAKKTVQDSP
ATVQDSPVKAPMSKESIDARKALATVYDKVLVVDNVKSARGVVQLLTSKYKNFIHACDTE
VANIDVKQETPVGHGEVICFSIYSGNSDAEADFGNGKTCIWVDVLDGGRDVLMEFAPFFE
DPSIRKVWHNYSFDSHVIENYGIKVAGFHADTMHLARLWDSSRRTDGGYSLEGLTNDHRV
MGAVPKELQKIGKRSMKTIFGWKKIKKDGSAGKIISMEPVKVLQRDDREMWICYSSLDSM
STLRLYESLKTKLEKKHWTFDGCPRGSLYDFYEEYWRPFGALLVKMETAGMLVDCAYLSE
IEKVAVAQRKLAADKFRKWASKYCPDAKYMNVNSDTQIRQLFFGGIENRCKPGETLPKSK
IIKVPNDGSLVAEGKKTPKYRTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKLTTD
LVYTIDDLEDDKCSSDSEISENDLNDTASYGTAYEAFGGGKKGKEACHAIAALCEICSID
SLISNFILPLQGNHISCTEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFV
AAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYQHIRDAVEERKV
LLEWHPQPGQDKPPVPLLKDAFGAERRKAKMLNFSIAYGKTPVGLARDWKVSVKEAKDTL
KLWYRDRKEVLAWQIKQKELAQEKCEVYTLLGRSRRFPNMAHATPGQRGHIERAAINAPV
QGSAADVAMCAMLEIDRNARLKELGWRLLLQVHDEVILEGPTESAGLAKAIVVECMSKPF
YGTNILNVELAVDAKCAQNWYAAK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccggcgccggcgccggcgcccgcgcagctgcggcggtgcccgtgctccgcg
cctctctgggctgcgccgccgtcgcccttccgctgccgccgccgccgcggcggcggctcg
ctgtcctcgccgttcatcggtggtggaaggcaggagtactcgcatagtagttcagggatt
ggagttaaagacaacagtgctttcaagattggagtgtataacaacttcagtgtgcaaagt
aacgcacaagaatggattgaggagagcaagagaatatcttcgatcaaaaccaggaatagt
gtgggaaatactatttataatggttccactcatctacgagcaggagttcttcatcatgaa
cccttggaagattacaaaagttccaaatattcttcattgtacagtgtaagagaaagaatg
gcacctaattctcttgcaaataggcatgctaacatggaactgacaaagcatcatctgatg
aatcaagctgtaagtgctgtgtcagcactgaccagtgttgtcaacgatgacattaaacca
ctcaacaagcctagtggttctgaactgaagactcaatggcctggtggtgctaagattgat
gcttctgtactgaagatttctaaagttgagacaagcctgcagtttgatgacgaagttagg
gatggttctgatggagatttgcctgaatgcacagccaagaagacagtacaagactctcca
gctacagtacaggattctccagttaaggcacccatgtccaaggagtctatagatgcgagg
aaggcacttgctactgtgtatgataaagttctggtggttgacaatgtgaaatcagctagg
ggtgttgttcagttgcttacttcaaagtacaaaaacttcattcatgcatgtgacacagag
gtagctaatattgacgttaaacaagagacaccagtgggccatggagaggtcatttgcttt
agcatctactctggcaactctgatgcagaagcagattttggaaatggcaaaacatgcatt
tgggtggatgtgctggatggtgggcgagatgtcctcatggagtttgctccatttttcgag
gacccttcaatcaggaaggtttggcacaactatagttttgatagccatgtcatagagaac
tatggaatcaaagttgctgggtttcatgctgatacaatgcatcttgcacgactttgggac
tcttcaagaagaactgatggaggttattcacttgaaggacttacaaatgatcacagagtc
atgggtgctgtaccaaaggaattacaaaagattggaaagagatcaatgaaaaccatcttt
ggttggaaaaagattaaaaaggatggatctgcagggaaaattatctctatggagcctgtc
aaagtgttacaaagggatgacagagaaatgtggatatgttattcttcattagattcaatg
agtaccttgcgactttatgaaagtttgaaaaccaagctggaaaaaaagcactggactttt
gatggttgccctagaggttccttgtatgatttctatgaggagtattggcgtccctttggt
gcccttcttgtcaagatggaaacagctggaatgcttgtcgactgtgcttatctttcagaa
attgaaaaggttgctgttgcacagaggaaactagctgcagataaatttcggaaatgggca
tctaaatattgtcctgatgcaaagtacatgaatgtcaacagcgatactcagattcgtcaa
ctgttctttggtggtatagagaatagatgcaaacctggtgaaactttgccgaagagtaaa
attattaaagtgccaaatgatggaagccttgttgcagagggcaagaagactccaaagtat
cgcactattgaacttttcagcattgtggaagatctgaaaaccgatctatttactgcaagt
ggctggccttcagtaagtggggatgcattgagaagtttggctggtaaactgacaactgat
cttgtttacacaatagatgatttagaggatgataaatgcagcagcgattcagaaatttct
gagaatgatctaaatgacactgcctcttacggaactgcatacgaagcatttggtggagga
aaaaaaggaaaggaagcgtgtcatgccattgcggctctctgtgagatatgttctattgac
tcattgatatccaactttattcttcccttacaggggaatcatatatcatgtacggagggg
cggatccactgttcattaaatataaacacagaaacagggcgtttgtcagcaagaacacca
aatttacagaatcaacctgcactggaaaaggataggtataaaatccgtcaagcttttgtg
gctgctcccgggaactctctcattgttgctgattatggtcagttggagctcaggatcttg
gcacatcttgctaattgtaaaagtatgttagatgctttcaaagctggtggtgacttccat
tccaggacagctatgaacatgtaccagcatatccgtgatgctgttgaagaaaggaaagtg
cttcttgaatggcatcctcaacctggccaagacaaacctcctgtacccttgttgaaggat
gcttttggtgctgagaggaggaaagctaaaatgcttaatttctccattgcatatggaaaa
acacctgttgggcttgctcgggattggaaggtttctgttaaggaagcaaaggataccctg
aaactctggtacagagatagaaaagaggttttagcttggcaaattaaacaaaaagaatta
gcacaggagaagtgtgaagtttacactttgcttgggcggtcacgccgctttcctaacatg
gctcatgcaactcctggtcaaaggggtcacatcgagcgggctgctatcaatgcaccagtg
cagggcagtgcagcagatgttgctatgtgtgcaatgcttgagatagatcggaatgctcgt
cttaaggaacttggttggaggcttctcttgcaggtgcatgatgaagtgatactggaagga
cccacggagtctgctggtctagccaaggccatagtggttgaatgcatgtctaagcccttc
tacggcaccaacatcctgaatgttgaactggctgttgatgccaagtgtgcacaaaattgg
tacgcggccaagtaa
DBGET
integrated database retrieval system
