Oryza brachyantha (malo sina): 102704163
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Entry
102704163 CDS
T02995
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102704163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102704163
Spliceosome [BR:
obr03041
]
Complex A
Other components
Complex A specific factors
102704163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
Motif
Other DBs
NCBI-GeneID:
102704163
NCBI-ProteinID:
XP_006659011
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All DBs
Position
8:57884..66977
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AA seq
755 aa
AA seq
DB search
MLDMGAKVDQSKPSLPPKISIFGAKPGFLIPKNKLPGSLVARSNAKNDFQSPSSSSSSSV
QDNNTNTKATLVQRNTRWGPDLTLDPAVRKSTASAYQTRLEQINKELKSGSMEISENEGS
VSGSNSDGANKQKENVQQGKAELLELERREIIGEILHLNPGYKVPEDYKPLLKETKIHLP
TKAHSGHNIIGVLMRPESNAQKRLQEETGAKIRVYGIKRSNGEKSEICQPDIDEAQDAYE
DLYINVSADSYDKVDSAIALIELLLTPVTVNSKSIEANATVSSAVSSSGADLSDLQQVQN
NSSQPGFLQYQSHNAHRLSTPQANDLSIPSSGYLQSALPNNSLQLQPPDGSFSMLSYTGP
PPLMDTMPRNPLPIPGPQPPMPNTQQPQLQFQPNPPIGPPFGRPPGIVSPQLTPSSTLPG
PVRPLQTPHASGGWLNFSSVPVQPQRLPTFMPVRPPISVSPLVSSPQLEGAAAPSFPCQS
NIATSYGTQHPSGASFAPSAALPSIPPGGPQSFPSVSPQGPSSMPMLSSPAGLTPQPPYP
LPMQMRPPMAISAQMRGPPSSFPQAGPTSGMPQTAPSSRLPSGFGVPGSGIMPAMRPLRP
STGDFTFRPHVSPSPTPELGTSGSQMPLFHPSNWRPPMARVEGFQRPLDMGYQPGVYGPP
PHPHLGGGFLPRNPGAPRTGGFVGAFPLQPPAVEAQRPLHVLPPPQQKAETSSGRQGLPP
IYDPFVPSAVSGGGKGKAEEDKAEYEDLMASVGVK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatgggcgcaaaagtcgaccaatcgaaaccctctctgccccccaagatctcc
attttcggtgccaaacctggatttcttatacccaagaacaagctacctggctctctcgtt
gcccgttccaacgccaagaatgattttcaatcaccttcttcttcttcttcttcctctgtc
caagacaacaacaccaacaccaaagctacccttgttcaacgaaacaccagatgggggccg
gatctcaccctggatcctgctgtccgaaaatccactgcttcggcctaccagactcgacta
gagcaaattaacaaggagctgaaatcaggatctatggagataagtgaaaatgaaggctca
gtgtctggctcaaactctgatggtgctaacaagcagaaagagaatgtgcagcaaggaaag
gctgagctcttggagcttgaaagaagagaaattataggtgaaatactccatttaaatcca
gggtataaggttcctgaagactataagcctttacttaaggagacaaaaatccatctgcct
acaaaagcacattcagggcataatataattggagttcttatgagacctgagagcaatgcc
cagaagcgactacaggaagaaactggagctaaaatacgagtatacgggattaaaagaagc
aatggagagaagagtgagatttgccaaccagacatagatgaagcacaagatgcctacgaa
gatctgtacataaatgtctcagctgactcttatgacaaagtagattctgcaattgcgctg
attgagctgcttcttactcctgtcactgtaaattcaaaatctattgaagcaaatgctacc
gtttcatcagcagttagctccagtggtgcagacttatctgaccttcagcaggtgcagaac
aacagttctcagccaggttttcttcagtatcaatcacataatgctcaccggctctcaaca
ccccaagccaatgatctatcaattccttcctctggatatctgcagagtgctttaccgaat
aactctttacagcttcagcctcctgatggttcttttagtatgctttcatatacagggcca
ccacctcttatggataccatgccaagaaacccactgcctattcctggacctcagccgccg
atgccaaacactcaacaacctcaacttcaattccaacccaatcccccaattggacctcct
tttggtagaccccctggaattgtaagcccacaactgacgccatcttccacgttgccaggg
cctgttagacctcttcaaacaccccatgcatctggaggatggctaaatttttcttcagtt
ccagtgcaacctcagaggttaccaacttttatgccagtgagacctcctatttctgtgtct
cctcttgtttcaagtccacagctggaaggtgctgctgctccatcgtttccttgtcaatca
aatatcgccactagctatggcacccagcatccatcaggtgcaagctttgcaccatcagca
gcattaccttccatacctcctggtggcccccaatcttttccttcagtgtcacctcagggt
ccttcctcaatgccaatgctgtcatctcctgctggtttaacaccgcagccaccttatccg
ctgcccatgcaaatgcgtcctcccatggcaatatctgctcaaatgagaggcccaccttca
tctttccctcaggctgggccaacttctggcatgccacaaacggcaccatcatcccgcctg
ccttctgggtttggtgtgcctggttctggaattatgcctgctatgagaccgctacgccca
agcactggtgattttacctttcggcctcatgtgtcaccttcaccaacaccagagcttggc
acatcaggcagtcaaatgccattgttccatcctagcaactggagaccacctatggcgcga
gttgaaggtttccaaaggcctctggatatgggttatcagcctggggtatatggtccacct
ccgcatccacaccttggtggaggcttcctcccgaggaatccaggtgcaccaaggacaggg
gggtttgttggagctttccccctccagccgccggcagttgaagcacaacggccgttacat
gtgttgccaccaccacaacaaaaggcggagacgagcagtggcaggcaaggcctgccgccg
atatacgacccttttgttccgagtgcagtgtcaggaggaggaaaagggaaagcggaggag
gacaaggctgagtacgaggatctcatggcatccgttggtgtcaagtga
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