Oryza brachyantha (malo sina): 102704171
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Entry
102704171 CDS
T02995
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102704171
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102704171
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
102704171
NCBI-ProteinID:
XP_040382704
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All DBs
Position
8:12847106..12852305
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AA seq
459 aa
AA seq
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MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGTNRNQAFVE
FADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGIQ
PNDITIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL
PDHAPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGISQPTLGPDGKIKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQ
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSDPSAQLQAAAQVPAATPGAA
WQNTAPAASFYASTAAASPVGQVSAWNPNMQAGAYGSASSAYPTQPMMPGSVPHYPGIGS
SSGAPPVSFQASQQMPQYGVPTAAPPHAPPAGQLMYFPK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggggtcggcgacccagttccggtacacgcagacgccgtccaaggtgctgcac
ctgcggaacatgccgtgggagtgcaccgaggaggagctcgtcgagctctgcaagcccttc
ggcagggtcgtcaacaccatgtgcaacgtcggcaccaaccgcaaccaggccttcgtcgag
ttcgcagatcaaaaccaggcaatttcaatggtttcatactatgcttcttcttcagaacct
gctcaagttcgtggtaaaactgtatatatccagtattcaaataggcaagaaattaccaac
aataaaggaactggtgattcctctggcaatgtcctgcttgtcacttttgaaggcatccag
cctaatgatattaccatagaagtcattcatctggtattttctgcatttgggtttgtccac
aagatagcaacctttgagaaggccgctggcttccaggcccttatccaatatactgatgcc
ccaactgctctagaagcaaaaaattcgttggatggaagaagcatcccaagatatttactt
cctgatcatgcccccacctgtcacttgcggatcaccttttctgcacacaaggatttgaat
atcaagtttcaatcacatcgtagcagggattacacaaatccatatcttcctgtgaaccca
acagcaattgagggaatttcacagcccacattaggccctgatgggaagataaaggaacct
gagagcaatgtacttctagcttcaatagagaacatgcagtatgctgtgacagtggatgtt
ctacatactgtgttctctgcttttggtactgtccaaaagattgcaatgtttgagaagaat
ggtggaatgcaagctcttattcaatatccagacatcacaacggcagcagttgctaaacaa
gctttggaagggcactgcatctatgatggaggttactgtaagcttcatctgtcatactct
cgtcatactgatctcaatgtaaaggcacatgacgagagaagcagagattacactgtttcg
gatcctagtgcgcaattgcaagctgcagcacaagtgccagcagcgactcctggagcggca
tggcaaaacactgcccctgctgcttccttttacgcaagcacggcagcagcgagtcctgtt
ggtcaagtgtcagcatggaatcctaacatgcaggcaggggcttacggatcagcatcatct
gcatacccaacccaaccgatgatgccaggctctgttccgcactatccaggaattgggtcc
agctccggtgcaccaccagtatcgttccaggcctcacagcagatgccacaatatggtgta
cccacagctgctccgccccatgcaccaccggctggccaactaatgtatttcccaaaataa
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