Oryza brachyantha (malo sina): 102704172
Help
Entry
102704172 CDS
T02995
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102704172
Enzymes [BR:
obr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102704172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
102704172
NCBI-ProteinID:
XP_006660373
UniProt:
J3MV69
LinkDB
All DBs
Position
8:17741762..17748089
Genome browser
AA seq
661 aa
AA seq
DB search
MGKLSCKNLLPCCMGPQPATSPAGTADATTGVRVKVSDRYVEIKNGIFELTLSNPDGIVT
GVRYNGVDNLMEILNKEDNRGYWDLVWSPLGERTGIFDVIKGTEFRIIYQDENQAEVSFV
RTWDPSLEGKAVPLNIDKRFIVLRGCSGFYTYGIYEHQEGWPGFSMGETRVAFKLRKDKF
RYMALADDRQRIMPMPEDRVPPRGQQLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQYN
NVHGWISFNPAIGFWQITPSDEFRTGGPVKQNLTSHVGPTMLAMFLSGHYAGDDLSPKFM
NGEYWKKVHGPVFMYLNSSWDGSDPTLLWEDAKVQMMIEKESWPYCFALSDDFQKTEQRG
CVSGRLLVRDRYLDDADLYATAAYVGLALPGDAGSWQRECKGYQFWCRAEDDGSFCIRNI
VTGDYNLYAWVPGFIGDYKLDATITISSGVDIYLGDLVYEPPRDGPTMWEIGIPDRSAFE
FYVPDPNPNYINRLYINHPDRFRQYGLWERYAELYPDSDLVYTIGQSDYTTDWFFAQVNR
RTDQNTYQPTTWQIKFNLDSVVPNSTYKFRVALASSANAELQVRFNDPDRSAPHFTSGLI
GRDNGIARHGIHGLYWLFNIDVSGAWLVQGMNTIYLKQPRNQSPFQGLMYDYLRMEGPSG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacttagctgcaagaatcttttgccgtgctgcatgggtccccaaccggcgacc
tcaccggccggcaccgccgacgccaccaccggcgtcagggttaaggtcagcgaccgatac
gttgagattaaaaatggcatctttgagcttacgctgtccaaccccgacgggatcgtgacc
ggcgtccggtataatggtgttgacaacttgatggaaattcttaacaaagaagacaacaga
gggtactgggaccttgtttggagtccactgggagaaagaactggcatatttgatgtaata
aaaggaacagagttccgaatcatatatcaggatgaaaaccaagcagaggtttccttcgtc
agaacttgggatccttctctagaaggcaaagctgttcccttgaacattgataagaggttc
attgtgctccgaggctgctctggattctacacctacggaatttatgagcatcaggaaggg
tggcctggttttagcatgggagagaccagggtggccttcaagcttcggaaagacaagttt
cgttacatggcactcgccgacgacaggcagagaataatgccaatgcctgaagaccgagta
cctccccgaggccagcaattagcataccctgaagctgtcctccttgtggaccctataaat
cctgacctaagaggggaggttgatgataagtaccagtactcgtgtgaagaccagtacaac
aatgtccacgggtggatatcattcaatcctgcaattggtttctggcagattactccgagt
gacgagttcagaacaggagggcctgtcaagcagaacctgacctctcatgtcgggccaact
atgctggctatgttccttagtggtcattatgctggggatgacctttcgcccaagttcatg
aatggagaatattggaaaaaggtccatggacctgtcttcatgtaccttaactccagttgg
gatggaagtgacccaactctactctgggaggatgcaaaagttcagatgatgattgagaaa
gagagctggccgtattgttttgcactttcagacgattttcagaagactgagcagagaggt
tgtgtctctggtagattacttgttcgagacaggtatttagatgatgcagatctttatgcc
acagcagcctatgtaggcttagccttaccaggagatgctggatcctggcaaagagagtgc
aagggataccaattctggtgtagagcagaagatgatggaagcttttgcataaggaacatt
gtaaccggagactacaacctttatgcatgggttccaggatttataggagactacaaactg
gatgctacaataaccatatcttcaggggttgacatttatctgggtgaccttgtgtatgaa
ccaccaagagatggtcccacgatgtgggagatcggaatacctgatcgatctgcctttgaa
ttttacgttccagaccctaatcccaactatatcaataggctgtatattaaccatcctgac
agatttaggcagtatggactttgggaaagatatgcagagctgtatccggatagtgatctg
gtatacacaattggccagagtgactataccactgattggttctttgctcaagtaaacaga
agaactgatcagaacacttaccagccaactacatggcaaataaagttcaatcttgacagt
gtggttcctaacagcacctacaaatttagagtggctcttgcatcatctgcaaacgctgag
ttgcaggttcgtttcaacgatccggacagaagtgctcctcacttcaccagtggattgatc
ggcagggacaatggcatagcgaggcatgggatccatgggctgtactggctgttcaacatc
gatgtgagtggggcttggcttgtccaagggatgaacactatctacctgaagcagcccagg
aaccagagtccctttcagggacttatgtatgattacctgagaatggaaggtccttctggc
aactaa
DBGET
integrated database retrieval system
