Oryza brachyantha (malo sina): 102704262
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Entry
102704262 CDS
T02995
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102704262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102704262
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102704262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
DUF5845
Beta-prop_TEP1_2nd
NPR3
Motif
Other DBs
NCBI-GeneID:
102704262
NCBI-ProteinID:
XP_006657927
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All DBs
Position
7:15734861..15737146
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AA seq
576 aa
AA seq
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MNSRRTATCLSRLGAAISPVKMSLISQNPLQKRRLERSEADDDSDEGLGSPVAVGDEDGN
ETKSEKNRKKEKKRKKAKAPEAKENKEREEMKKLESSLFGALYALPQFGTEVEAADPDRD
APSFFVDRSAGDGEDDLPAYEEGLSSEDEGDNMVGRERRPAWVDEEEMTEVDISKVARLR
KLRKEVDERVISGREYEARLRGQHAKLNPFTGWADMNRKAHFPGFSDNESDEEGGVDDIL
RNNDELVVKDNAKLLPGMLGFSRLIDANAQEPSNGPINSVQFHRNGQLMLVAGLDKHLRF
FQIDGKRNPKIQSMFIEDCPVHKAAFLPDGSEVILSGRRKFFYSFDLVNATVSKIGPLTG
REEKSLEHFEISPDSKTIAFIGNEGYILLISSKTKQLIGTLKMNGNVRSLAFADGGNQLL
SSGGDGHVYHWDLRTRKCIHKGTDEGSLAGISLCTSHNSSLFATGSTSGIVNVYKRDDFL
GGKRKPLKTIENLTTEIGEMKFNHDAQVLAISSRKERNGMRLVHVPSLTVFQNWPGPRFS
LHYPRCLDFSPGSGFLSVGHAGGKVLLYKLHHYQHA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcgccgcaccgccacctgcctgtcgcggcttggcgcggccatttctccagtc
aagatgagtttgatatctcagaatccccttcagaagcgccgtctggagagaagtgaagct
gatgatgatagtgatgagggattgggctctcccgttgctgtgggagatgaggatgggaat
gaaaccaagtcagagaagaatcgcaaaaaggagaagaagagaaagaaggccaaggcgccg
gaggcgaaggagaataaggagagggaggagatgaagaagctggagagctccttgtttggt
gccctctatgcactgccgcagtttggcactgaggttgaggctgcggaccctgacagggat
gcaccttcattcttcgtggataggtctgctggtgatggtgaggatgatttgcctgcgtat
gaggagggcttgtccagtgaagacgagggggataacatggttggcagggagaggaggccc
gcatgggtggatgaggaggagatgactgaggtggacatttcgaaggttgcaaggctgagg
aagttgagaaaggaggttgatgagcgtgtgatctcaggcagagaatatgaggccaggttg
cgaggtcaacacgccaagttgaaccccttcactggttgggctgatatgaaccgtaaagct
cattttcctgggttctcagacaatgaatctgatgaagagggtggagttgatgatattctt
cgaaataatgatgagcttgttgtcaaggataatgcgaagctcttacctggcatgcttggt
ttctctagacttatagatgcaaatgcccaggagccatccaatggccctatcaattcagtg
cagtttcacaggaatgggcagcttatgcttgttgctggtttggacaagcatctgagattt
ttccagattgatgggaagagaaaccccaagatccagagcatgtttattgaggactgccct
gttcacaaggctgcatttctgcctgatggttctgaggttatcctttcaggcaggaggaag
ttcttctactcatttgatctggtgaatgctactgttagtaagattggacccttaacagga
cgcgaggagaaaagcttagaacattttgagatatctcctgattcgaagaccattgcattc
attggtaacgaggggtacattcttttgatttcttccaaaacaaagcagctaataggaacc
ctcaagatgaatggaaatgtgcgttcgttggcttttgctgatggtgggaaccaactactg
agcagtggtggggatggccatgtttaccactgggatcttagaacgaggaagtgtatccac
aagggtactgatgagggttccttggcaggcatttcgctttgcacttcacacaacagctct
ctgtttgccaccggctccaccagcggcatcgtcaacgtgtacaagagggatgatttcctt
ggcgggaagaggaagccgctgaagacgatcgagaacctcacgaccgagatcggtgaaatg
aagttcaaccatgatgcccaggttctggcaataagctcaagaaaggagaggaacgggatg
aggcttgttcatgtcccatcccttactgtgttccagaactggccaggccctcgattcagc
cttcactacccgcgttgcttggacttcagcccaggcagcgggtttctgtctgtcggacac
gctgggggaaaagttttgctgtataagctgcaccactaccaacatgcctaa
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