Oryza brachyantha (malo sina): 102704508
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Entry
102704508 CDS
T02995
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102704508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102704508
04121 Ubiquitin system [BR:
obr04121
]
102704508
03036 Chromosome and associated proteins [BR:
obr03036
]
102704508
03400 DNA repair and recombination proteins [BR:
obr03400
]
102704508
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102704508
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102704508
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102704508
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102704508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
PTCB-BRCT
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
PHD_NSD
zf-RING_10
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
102704508
NCBI-ProteinID:
XP_006652508
UniProt:
J3LZI8
LinkDB
All DBs
Position
4:complement(14173660..14177522)
Genome browser
AA seq
630 aa
AA seq
DB search
MESLRRFLNPLVLNLQKMELELTCPVCLKLLSAPTMLPCYHTSCSKCATTRTMNGYSCAI
CKSAYRSQDLKPASHLEAIVNIHRSLSSTVSSMVTQQEVQADIPVAKTSFQGTPESGNKN
GAEKADQMNSYNPIGSKLAYNQSTESTRPAYGNVDFAKERNPAMETRGADVTAMPTILMH
KGPCGSQSSDGPRDLDCDSNDLEGELITSRSSPQSVLKRDPNVVNDDNRELKRQKSTDQD
DRPPAIPGAWKCEFCHSSKTTESTGPLSHYLHGEPLEDSQAWKSNVLHVHEKCIEWAPQA
FFTGDIANNLEPELARASKIKCSVCGLKGAALGCLVKSCRKSFHVPCAHGIPGCRWDEEN
FVMLCPSHSSKKLPCERSKSKTKIRLQRSSSDTVLDDLNSPSPIQMDGLWTASPFLTSQW
VICGSALSSQEKEILDQFEHQTGITVTNSWRSNVTHVIANTDERGACARTLKVLMAILAG
KWVLNINWLKACMEAREPVPEEPYEINSDVHGSFDGPRMGRLRMMQNAPHLFAGLTFYFS
GHFMPNYKVHLEDLITAAGGSILDKADISTTSVILYSMEPPQGSNPDTLNEVIRKRKAEA
EELASTVGCRAVPHTCVLDSIASCTVQLAM
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttgaggaggttcctgaacccgctggtgctcaacctgcagaagatggagctg
gaactcacctgccccgtctgtctgaagttgctcagcgcgcctaccatgctgccatgttac
cacacttcctgcagcaagtgtgctactacacggaccatgaatggttacagctgcgccatt
tgcaaatcagcctatcgttctcaagacctaaagcctgcctctcacctcgaggcaatagtg
aacatccacaggagcctaagctctactgtcagcagcatggtcacgcagcaggaggttcaa
gctgatattcctgttgcaaagacatcattccaaggaacaccagaatcgggaaacaaaaat
ggagcggaaaaggctgaccagatgaactcctacaatccgattggttctaagctggcatac
aaccagtcaaccgagtcaaccaggcctgcatatggaaatgtggatttcgcgaaagaaagg
aatcctgcaatggaaaccagaggtgctgatgtgactgctatgcccacaattcttatgcat
aagggaccctgcggatctcaatcttctgatggtcctagggatctggattgtgacagcaat
gaccttgaaggagagctgataacgagcagatcatctcctcaaagtgtcctgaaaagagat
ccaaatgtagtgaatgatgataatagagagttgaagaggcaaaagtccactgatcaggat
gacagaccaccagccattcctggtgcttggaaatgtgaattttgtcactcttccaaaacc
actgagagtactggacctttgtcgcattatctgcatggtgagccattagaggatagccaa
gcgtggaaatcaaatgttcttcatgttcatgaaaaatgcattgaatgggctcctcaagca
ttctttactggtgacattgcaaataacttggagcccgagttggcccgtgcttctaagatc
aaatgcagtgtttgcggactaaaaggtgcagcccttggctgccttgtcaagagctgccgg
aagagcttccatgtcccttgtgcccatgggatcccaggctgccgatgggatgaagaaaac
tttgttatgctgtgtccttctcattcctcaaagaagttgccatgtgagagatcaaagtca
aaaactaagatcaggctacagcgatcatcttctgatacggtgcttgatgacctgaactca
ccatctccaatccaaatggatggactttggactgcctcgccttttctcactagtcaatgg
gtgatatgtggatccgctctctctagtcaggagaaggaaatcttggaccagtttgagcac
caaactggcatcacagtaactaacagctggaggtcgaatgtgactcatgtaattgctaat
acagatgaacgcggggcatgtgccaggacactcaaggttctcatggccatactagctggg
aaatgggttctgaatataaactggctgaaagcttgtatggaggctagagaaccagtccca
gaagagccctatgagatcaattccgatgttcatggctcctttgatggccctcgcatggga
agactacggatgatgcaaaatgcaccacatctgtttgcaggactgactttttacttcagt
ggccatttcatgccaaattacaaggttcaccttgaagatttgatcaccgcagctggggga
tcgatcttggacaaggctgatatctctaccacatccgtgatattgtacagcatggagccg
ccacaaggaagtaatccagatacacttaacgaggttatcagaaagagaaaggccgaggct
gaagaattggcgtcaacagttggctgcagggctgttcctcatacatgtgttctggattct
attgcatcatgcaccgttcaattggccatgtga
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