Oryza brachyantha (malo sina): 102704556
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Entry
102704556 CDS
T02995
Name
(RefSeq) replication factor C subunit 3-like isoform X3
KO
K10756
replication factor C subunit 3/5
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102704556
03410 Base excision repair
102704556
03420 Nucleotide excision repair
102704556
03430 Mismatch repair
102704556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102704556
03036 Chromosome and associated proteins [BR:
obr03036
]
102704556
03400 DNA repair and recombination proteins [BR:
obr03400
]
102704556
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102704556
DNA Replication Termination Factors
ELG1-RFC complex
102704556
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102704556
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102704556
Check point factors
HRAD17(Rad24)-RFC complex
102704556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
nSTAND3
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
102704556
NCBI-ProteinID:
XP_015697149
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All DBs
Position
10:complement(15939690..15943201)
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AA seq
584 aa
AA seq
DB search
MARPASPSPTLSAALDRDLRRDARRSLLFRPGRSLSYLMLSLHRFGAACLTGSGAALSRP
RTPRSTPPHSPRREGPQVANVAVAVAERRPLREREEAATKRIHDAPAESKHESVTQSEMS
VGDHSMQTQSEVSAGDHSIQSTPASSTVGRGGNIWVRVLPKTVTFQSQVDSPPTSAESTP
AAEDEYVWADKYRPNFLKDFICNKDAARELYQQVTAQECNHIIFEGPPAVGKRSMVSALI
RDALAPDGLKTEEIIKRFELKGEIAKHIDIRVKISGHHVEVNLADIHGYEKHVITTLLNE
SIPSPNSICSHANCRVIVVHDADKLSYDLQHYIGWFLGRYVGCNKIMFCCSDASNLEDVR
HLCKVVTLKPPSFDEIIKVLEYIAVQEGIDLPHDIARRITMSAGNNLRQAIRSFEATWKA
NYAFLEGHAILTGWEEEISNVAKKILEEPSSKQLFVIRGKIRKLIEHNVSPYFIFSHLVA
ELKRDRDEEFQNSIDELASELNRVSMTAASSCKDCMLQKEQCKECKSRDTTLETRNINIE
GFAKKGHDPGETIQCFIKIEEFTVRFMGFYRSLKAKNTNRGGGL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccggcgtccccgtcccccaccctctccgccgcgctcgaccgggacctccgc
cgcgacgcccgccgcagcctcctattccgacctgggaggtcgttgtcctacctcatgctc
agcctccaccgcttcggcgccgcttgcctcaccgggagcggcgccgccctctcccgcccc
cgcacccctaggtccacgcccccgcactcgccacgccgggaggggccccaggtggccaat
gtcgccgtcgccgtcgccgagaggaggcctttgagggagagagaggaagccgccaccaag
cgcatccacgacgcgccggcggaatccaaacacgaatcggtcacgcaatctgagatgtcc
gtcggcgatcacagcatgcagacacaatctgaggtctccgccggcgaccacagcatccag
agcacgccggcctcctctaccgtcgggaggggagggaatatctgggtcagggttttgccc
aagacagtcaccttccaatcgcaggtggactccccgccgacgtctgcagagtccacgccg
gcggcagaggacgagtacgtttgggcagacaagtaccgccccaatttcctcaaggacttc
atctgcaacaaagacgccgcacgtgagctctatcagcaggtcactgctcaagaatgtaac
catatcatatttgaaggcccgcccgcggtcgggaagagaagcatggtatcagcactcata
agggatgctttagctcctgatggtctcaagacagaggaaataataaagagattcgagttg
aagggagaaattgccaaacacattgatatcagagtgaagatttcaggtcatcatgtagag
gtaaatttggctgatatacacggctatgagaagcatgtcattactactttgttgaatgaa
tccatcccatcaccaaactccatttgcagtcacgctaattgcagagtgattgttgtccat
gacgctgataaactctcatatgatcttcaacattatatcggatggtttctggggaggtat
gtaggctgcaataaaatcatgttctgctgttctgatgcttcaaaccttgaggatgtcagg
catctctgcaaggttgtgacacttaagccaccttcatttgatgagataatcaaggtccta
gagtacattgcagttcaagagggcatagatctgcctcatgatattgctaggagaataaca
atgagcgcaggcaataatctccgacaggcaatacgttcttttgaagctacttggaaagca
aactatgcgttcctagaaggccatgccattttgacaggatgggaggaggaaatctccaat
gtagcgaaaaaaatcttggaggaaccaagctcaaagcagttatttgtcattcgggggaag
atcagaaaactgattgaacataatgtgtccccttatttcattttctctcatctggttgct
gaactaaaaagggacagggacgaggagttccaaaatagcatcgacgaactagcgtcagag
ttgaaccgtgttagcatgactgctgcatcttcatgtaaagactgcatgcttcaaaaggag
cagtgcaaagagtgcaaatctcgtgacacaactttagaaaccagaaacatcaatatagaa
ggttttgccaagaagggccatgacccaggcgaaaccatccaatgctttattaagattgaa
gaattcaccgtgagatttatgggcttctacagatctttaaaagcaaagaacacgaataga
ggagggggtctataa
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