KEGG   Oryza brachyantha (malo sina): 102704758
Entry
102704758         CDS       T02995                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obr03041]
    102704758
Spliceosome [BR:obr03041]
 Complex B
  Other components
   Complex B specific factors
    102704758
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 LisH_TPL Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_SCAP Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_WDR75_2nd DUF7165 VPS8_N Beta-prop_HPS5 Nucleoporin_N Beta-prop_IFT122_2nd PEP5_VPS11_N Beta-prop_IP5PC_F Beta-prop_LRRK2 zf_topless
Other DBs
NCBI-GeneID: 102704758
NCBI-ProteinID: XP_006645831
UniProt: J3KZB8
LinkDB
Position
1:complement(9344706..9351633)
AA seq 517 aa
MASSASTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYL
RLEHLLVRTYFDPNEAYQESTKEKRRAQISQAIASEVSVVPPSRLMALIGQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEEAYPTTLSHQIKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYISGKLKKDLQYQADESFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTG
QCLRRLERAHAKGVTSVTFSRDGTQILSTSFDTTARIHGLKSGKMLKEFRGHNSYVNCAI
FSADGTRVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVC
NKTSSIYIMTLQGQVVKSFSSGKREGGDFLAASVSPKGEWIYCVGEDMNMYCFSYQSGKL
EHLMKVHDKDVIGITHHPHRNLIATYAEDCTMKTWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggcgtccaccctcgagatcgaggcccgcgacgtggtgaagatcgtgctg
cagttctgcaaggagaactcgctgcagcagacgttccagacgctgcagaacgagtgccag
gtctcgctcaacaccgtcgacagcatcgacactttcatcgccgacatcaatgccgggcgc
tgggacgctgtgctgccccaggttgctcagctcaagctgccgcggaagaagcttgaggac
ctctacgagcagattgtgctggaaatggctgagctccgtgagctggacacggcccgtgcc
atcctccgccagacacaggtcatgggcgttatgaagcaggagcagcccgagcggtacctc
cggcttgagcaccttcttgtgcggacatactttgaccccaatgaggcctaccaagaatcc
accaaggagaaacggcgtgcacagatttctcaagctattgcttctgaagtttcagtagtt
ccgccttctcggctaatggcattgattggtcaggctttgaaatggcaacagcaccaagga
ttgttaccacctggcacacagtttgatttattcaggggaaccgctgcaatgaagcaagat
gaagaggaggcatatcctactaccttatcacatcaaataaagttcgggaagaaaacccac
cctgaatgtgctcgattttcacctgatggtcagtaccttgtatcatgctcagtggatgga
atcattgaggtttgggattatatcagtgggaagcttaaaaaggatcttcaatatcaagct
gatgaaagcttcatgatgcacgatgatgctgtgctttgtgttgatttcagcagagattct
gagatgctggcatctggatcacaggatggaaagattaaggtttggcgcatacgaaccggc
caatgtttgcgtcgccttgagcgtgcacatgcaaaaggtgttacaagtgttacattctca
cgtgacggaactcagatattgagtacatcctttgacactactgcaagaatacatggcctc
aagtctggaaagatgctgaaggaattccgaggccataactcatatgtgaattgtgcaatc
ttttctgcagatggtacccgtgttattacagcctccagtgattgtactgttaaggtctgg
gatacgaaaacaacagattgtttgcaaacgttcaagccaccacctcctttgaggggagga
gatgcatctgttaactctgtccatttatttccaaagaatactgatcacattattgtgtgc
aataagacatcatcaatatacataatgactctacaaggacaggttgtgaaaagtttttca
tctggtaaacgggaaggaggagatttccttgcagcttctgtttcaccaaaaggagaatgg
atatattgtgttggtgaagacatgaacatgtattgctttagctaccaatctggtaaattg
gagcatctaatgaaggtccacgacaaggatgtgataggcatcactcaccaccctcatagg
aacttgattgctacttatgctgaagattgcaccatgaaaacatggaagccttga

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