Oryza brachyantha (malo sina): 102704774
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Entry
102704774 CDS
T02995
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obr03016
]
102704774
Enzymes [BR:
obr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102704774
Transfer RNA biogenesis [BR:
obr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102704774
Prokaryotic type
102704774
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PCB_OB
DUF6581
Motif
Other DBs
NCBI-GeneID:
102704774
NCBI-ProteinID:
XP_006647660
LinkDB
All DBs
Position
2:20311677..20314578
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AA seq
569 aa
AA seq
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MAAASPPASPPHPKRPKMSSSSDPDAEPTSPSAADARGQPRAPRYKRRKVAIMLGYCGAG
YQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVVSGR
FYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAHPDR
EAVMASVGSGSELTKCVECSERGRKVPGVMGREGKVPDSVFQEEKSVEITREETAVGSNG
HANCDPSSTGDCTIDLPIPCDESEAQITEMSSSGAENCDVEPSGATFCAEAVPASITKTV
CSNLNSDANTNSDSVHAAPSSMPENKDTFEAVVTENEQERAMDVERSNGEEMTLKGSTFS
YTDEVKEKFNRILKYYVGTHNFHNFTTRTKAEDPSAKRFIISFAADRVVSLDGIDFIRCE
VVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFSS
YNKKWKDSHEAVSMEPYSEEAEEFKIKYIFSHIAAMELKEGAVALWLHSLNSRNYPDFRY
MDNAGTEVSVGVAVESVDEGTVPSDNITE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccaccggcctctccgccccaccccaagcgccccaagatgtcctcc
tcctccgaccccgacgcggagcccacatctccttctgccgccgacgccagggggcagccc
cgcgccccccgctacaagcgccgtaaggtggccatcatgctcggctactgcggcgctggg
taccagggcatgcagaagaaccccggcgcgcgcaccatcgagggggacctggaggaggcg
ctctaccaggccggtgccgtgcccgaggccgaccgcgccgcgccccgccgctacgactgg
gcccgcgcggcgcgcaccgacaagggcgttagcgccgcggcgcaggtcgtctccggtcgc
ttctacgtcgacccgcccgtcttcactgatcgcctgaatgcccagctcgcgccccagatc
cgcgctttcggctacgtccgtgtcactaactcgttcaacgctaagaagttctgcgaccgc
cggaggtacgtgtacctgctccccgtgttcgcactagaccccagcgcacaccccgaccgc
gaggctgtcatggcgagcgtcgggagtgggagtgagcttacgaagtgcgttgagtgctca
gagaggggaaggaaggtgcccggtgtcatgggccgggaagggaaggtacccgattctgtc
tttcaggaggagaaatctgttgagattacccgggaggaaactgcggtaggttcaaatgga
catgcaaattgtgatccttcaagcactggcgattgtactattgatttacctatcccttgt
gatgaatccgaagcccaaattactgaaatgagttcaagtggtgcagaaaactgtgatgtt
gaaccatcaggtgctactttttgtgctgaagctgtacccgctagcatcactaagactgtt
tgttccaacctgaattcggatgccaacacaaattcagattcagttcatgctgctccttca
tctatgcctgaaaataaggatacttttgaggctgttgttactgaaaatgaacaggaacga
gctatggatgttgaaaggagcaatggggaagagatgaccctgaagggaagtacattttct
tatactgatgaagtcaaagagaagtttaatagaattctcaaatattatgttggcacacac
aatttccacaacttcacaaccagaactaaagcagaggatccttcagccaaaaggttcatt
atttcctttgctgctgatcgtgtcgtcagtctggatgggattgattttatcagatgcgag
gttgttggccagagtttcatgctccatcagattaggaagatggttgggcttgctgttgca
gtgatgaggaactgtgctccagagtcaatctatgatgtagcttttcgcaaggatgtcaat
cttaatgtgcctactgcacccgaggttgggctgtacctagatgaatgcatgttctcttca
tataacaagaaatggaaggattcacatgaggcggtttctatggaaccttattctgaggag
gccgaagagtttaagatcaagtatatattctctcatattgctgcaatggagctcaaggag
ggagctgtagctctctggttgcattcattgaacagcagaaattatccagatttccgctac
atggataatgctggaactgaggtaagtgttggtgttgcagttgagagtgttgatgaaggg
acggtgccaagtgataatattacggaataa
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