Oryza brachyantha (malo sina): 102704955
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Entry
102704955 CDS
T02995
Name
(RefSeq) uncharacterized protein LOC102704955
KO
K19022
AP-5 complex subunit beta-1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102704955
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
102704955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
102704955
NCBI-ProteinID:
XP_006649198
LinkDB
All DBs
Position
2:27229719..27233459
Genome browser
AA seq
1093 aa
AA seq
DB search
MDRPAAPASLSSQDWEQLIDDFSTPRRHRWLHLPLLDLALSSLPRRDLPSHLRPLLLSFL
DDHLLPPSPSHLPLFLASLLSFPSDHPLRDHLLVTVTSAFASALSAPISADHLDPLSGIV
NALLASANRPNHAPDRAARALACDALRALDAALPGLLADVLGHVYALAAAERSPAAQSYL
LLLASAARHVVRLGRLSSATSILAVSGPPTPFSVPGHLLSPAPAPADPLPPSEANLRDIR
KVLALIMERPQVLTPAAAMEMAAILAEVSTAVVGWAPAIAAHVKVQFGGMAHSSSLMLLH
SVLTLFVQFPDAFGAEDERKMARRLALAAREAHRPLPARLLALHWLLGSEKFRFAVPGLS
RWFYPGVFDPLAVKAKKLDCLALVSVGIDGEKTEGARDVNQPIGLVDDGLACVAAFRWLP
GWSTETGVAFRALHEVLIAAAPHSLDGSGCSGAGELLNSTIFHHLQAMLVDMTSEHRGLV
PVIADFINRLLACNTHRWAGEQLLRTLDENLLPRLEPGYQLASYYPLFEKIAENETVPQL
RLIELLTKQMVSLAKKHDPETELKTWSQGSKVVGICRVMLKHHHSSSIFVPLSRLLVLTI
KSYPDLEVRDHARIYLRMLSCIPGKKLRHLMGIGEQPAGVTPSHPGPLFDVPSPRPSQDL
KSMPGLTSYIHLERVVPLVVKQSWALTLPNFSIQSRASGHILSIQDVSSTPPEQEKTPQP
TIERIGYTPEALRVMDSKGAETLEILRRHFACIPDYLHSSGLKIRIPCTFRFDSEPFNHA
WGSDSAVPGSEGVDGLPALYAVTINFSSSAQFGKIPSCHVPFLLGEPPGSGMDIVPLDNG
HQLESSYCASVVIELEPREPSPGLIDVVITANTEDCQVISGSIQPITVGIEDMFLKASVP
HDILKEDVAEYYQDLFHALWEACNSCSSTGRETFSLAGGKGSAAINGTRSVKLLEVTPKV
LIRAIERYLAPFVVSVAGDSLVTILRGNAIIKNIVWEESESATTVGADALVPYSVDTNLS
LRRSDEDEFEVGAETYAHLSKRDMGIVRVLIFLPPRYHLLFSMEVGYASTLVRIRTDHWP
CLAYVDEYLEALL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcccgccgcccccgcctccctctcgtctcaggactgggagcagctcatcgac
gacttctccaccccgcgccgccaccgatggctccacctccccctcctcgacctcgccctc
tcctccctcccgcgccgcgacctcccctcccacctcaggccgctcctcctctccttcctc
gacgaccacctcctcccgccctccccctcccacctcccgctcttcctcgcctccctcctc
tccttcccctccgaccacccgctccgcgaccacctcctcgtcaccgttacatccgccttc
gcctccgcgctctccgcccccatctccgccgaccacctcgaccccctctccgggatcgtc
aacgcactgctcgcctccgccaaccgccccaaccacgctcccgaccgcgccgcccgcgcc
ctcgcctgcgacgccctgcgcgcgctcgacgccgcgctcccgggcctcctcgccgacgtc
ctcggccacgtctacgctctcgccgccgccgagcgctcgccggccgcgcagtcctatctc
ctcctcctcgcctccgccgcccgccacgtcgttcgcctcgggaggctcagctccgccacc
tccatcctggcggtgtccggaccgcccacccctttctctgtgcccgggcacctcctctcg
cctgcgcccgctcctgccgatcccctgcctccttcggaggcgaatttgagggacataagg
aaggtgctcgctttgatcatggagaggccacaggtcctcacgcctgcagccgccatggag
atggcggccatccttgcagaggtgtctacagctgttgtggggtgggcgccggcgatcgca
gcgcacgtcaaggtgcagtttggcgggatggcacattcgtccagcctcatgcttctgcac
tcggtgctcacgctgttcgtccagtttccagatgcatttggggctgaagatgagcgtaaa
atggcacgccgtctagctttggctgctcgtgaggcacaccggccgcttccagcacggttg
ctcgcgttgcattggcttcttgggtctgaaaagtttagatttgcagtgcctggcctttct
agatggttttatcctggtgtgttcgacccgcttgctgtcaaggccaagaagctagattgt
ctagctcttgtttctgttgggattgatggcgagaagactgaaggtgccagagatgtgaac
cagccaattgggctcgtcgatgatggattggcttgcgttgcagccttcaggtggctccca
ggatggagcactgagactggtgtggcgttccgggcgctacatgaggtcttgattgctgct
gctcctcacagtcttgatggctcaggttgctccggagctggtgagctcctgaattctact
atcttccaccatttacaggctatgctggttgatatgacatcagaacatcgaggtttagtc
ccagtaattgctgatttcatcaaccgtcttctagcatgcaacacgcatcggtgggcaggg
gagcaattgctgcgaacacttgatgagaatctgcttccgaggcttgaaccaggctaccaa
ctggcatcgtactacccgctctttgagaagatcgcggagaatgagacagttcctcagctc
cgcctaatagagttgctcaccaagcagatggtttcacttgccaagaagcatgatccagag
acagaactgaaaacatggtctcagggcagcaaggtagtgggcatttgtcgtgttatgctg
aagcaccatcacagctcttccatctttgttccactctcacgcctacttgttctcactatc
aagtcctacccagatctggaggtccgggaccatgcaaggatatatttgcgaatgctgtct
tgcattcctggaaagaagctgaggcatctcatgggaatcggagagcaacctgcaggtgtt
acaccctctcatccaggtcctttgtttgatgtcccatcgccacgtccttctcaagatctt
aagagcatgcctggcttaacgtcttacattcatctcgaaagagttgtgcctctggttgtg
aagcagtcttgggcccttacattgcctaacttcagcatccagagcagagcatctggtcac
attctaagtatacaggatgtaagctcaactcctccggagcaagaaaagacaccccaacct
accatcgagagaattggctacacaccagaagcgttgcgtgtgatggattctaagggtgct
gaaacactggaaatccttaggaggcactttgcatgcattcctgattacctccactcatct
ggtctcaaaataagaataccttgcacatttaggtttgattcagagccatttaaccatgct
tggggatctgattcagcagttccaggttctgaaggggttgatgggttgccggccctttat
gcagtgacaattaatttttcatcgagtgcacagtttgggaaaatcccttcatgtcatgta
cctttccttctaggtgaacctccagggtctggtatggacattgtgcccttagataatggc
caccagttagagtcaagttattgtgcttcagtagtgattgaattagagcctcgagaacca
tcacctggtcttattgatgttgtcatcactgccaacacggaggattgccaagtcatatct
gggtccattcaacccattacagttggcatcgaggacatgtttctgaaggccagtgtacct
cacgatattctgaaagaggatgtagctgagtattaccaggatctgttccatgctttatgg
gaggcctgcaacagttgttcgagcacaggtcgggagaccttctctttggcaggagggaaa
gggtctgctgcgattaatggaacacggtctgtcaaacttcttgaggtgactccaaaggtt
ttgattagagctattgaaagatacctggctccctttgttgtcagtgttgctggagattca
cttgttaccattctaagaggcaatgctattattaagaacatcgtgtgggaggaaagtgaa
tcagctactactgttggtgcagatgcgttggttccatactcagtggacacaaacctttcg
cttcggcgtagtgacgaagatgaatttgaggttggagcagagacttatgcccatctaagc
aagagggatatgggcattgtgcgtgtcctaatatttctaccaccaaggtatcatctcctc
ttttcgatggaagtaggctatgcctccacattggttaggataagaaccgatcattggcca
tgtttggcatacgtcgatgaatacttggaagcattgctctaa
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