Oryza brachyantha (malo sina): 102705076
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Entry
102705076 CDS
T02995
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102705076
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102705076
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102705076
03036 Chromosome and associated proteins [BR:
obr03036
]
102705076
03400 DNA repair and recombination proteins [BR:
obr03400
]
102705076
Peptidases and inhibitors [BR:
obr01002
]
Metallo peptidases
Family M67
102705076
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102705076
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
102705076
BRISC complex
102705076
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
102705076
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102705076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
102705076
NCBI-ProteinID:
XP_040380432
LinkDB
All DBs
Position
5:17919422..17926531
Genome browser
AA seq
425 aa
AA seq
DB search
MSLTEVRIGEEVWLTCLSHALTTETEEVMGLLFGDIKHSSRGGVTAVIWGASPQMRCDRK
KDRVEVNPELLAAATAQAESLSATIGEKTRVIGWYHSHPHITVLPSHVDVRTQAMFQLME
PGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNHQSIVPVNDPVINLESSWSSLDTSSHPA
LIEGIEQDTGDSKTSRNSKVWEKSSDVDFYSHSGTNHSAKHQSRENAIVACDPNNAPETP
VDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTGHLLKLDTTLTSYCDMQHVI
FEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLMEYCLSPAITVLQDRLKENE
IRLSMLMEEAKQLEAENQSMRNDSPRRLMYHGTSGSSSLMAQDKHAAANQMSPRSPSGSS
RRKAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacggaggtcaggatcggggaggaggtgtggctcacgtgcctctcccacgcc
ctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattcgagc
aggggcggggtgactgctgtgatatggggggcgtcgccgcagatgaggtgcgaccggaag
aaggacagggtcgaggtcaaccccgagctgctcgcggcggccacggcgcaggccgagagc
ttgtcggccaccatcggggaaaaaacgagggtgattgggtggtaccactcgcacccgcat
atcaccgtgctgccatcccatgtagatgttcggacccaggcaatgtttcagttgatggaa
ccaggctttgtgggtttgatattctcttgttttagtgaagatgctcaaaaggttggaaaa
atccaagtaattgcctttcagtcacttggtggaaatcatcaatctattgtccctgttaat
gatccagtcattaaccttgaatcatcttggagttcattggatacttcttcacatcctgca
ttgatcgagggcattgaacaagacacgggggattctaaaacttcaagaaatagcaaggtg
tgggaaaaatcttccgatgtggatttctattctcattctggcaccaatcattcagcaaaa
catcaatccagagaaaatgctatcgttgcatgtgatcccaataacgcacctgagacccct
gtcgatctagatgaatcagatatgaccccaagcatccaggaggcgttgcaccggtcaaac
atggacattagtggtgcagaatatgtaagaaaggaggtcccactttatgtatttccgaca
gggcatctgctaaagctggacactacattaacttcttactgtgatatgcaacatgtcatt
tttgaagaggaaaaatcggcatataatcaagccatgcatcaaaatattcgtgatgggaag
atccacccacttacatctattcaccatgcatctacgtacaattcatctctctgcaaatta
atggaatattgtttgagccctgctataactgtacttcaggatcgtctgaaggaaaatgaa
attcggttatctatgttaatggaggaggctaaacaacttgaggcagagaaccaaagcatg
agaaatgattctcctcgtcgcttgatgtatcatgggactagtggtagcagttctctgatg
gctcaggacaagcatgctgctgccaaccaaatgagccctagaagtcctagtggcagcagc
cggagaaaggcttcctga
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