Oryza brachyantha (malo sina): 102705504
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Entry
102705504 CDS
T02995
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102705504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obr04040
]
102705504
Ion channels [BR:
obr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102705504
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
102705504
NCBI-ProteinID:
XP_006647986
UniProt:
J3LHJ4
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Position
2:24881611..24891304
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AA seq
763 aa
AA seq
DB search
MPDQERDDIPMLQRNVELPKFPLRSTSMCIPVRDDVYEEDTFIPHTGPLFVQPPTQPAAV
GIPFTSRDALDMPPRPSQGKQVNKPHAVMPEEIQGNRWSYSGDIPKNEHLMMSGPLGQCD
NPDCVNCPPACKSKRHFHKGPNTLDSKFQIFLYKHGGGWKKEIEHFLSRIPVMNPHAKIV
QQWNQFFVISCLVAIFIDPLFFFLLSVEKGNKCIVLNWHFATALAVVRSLTDAIYFVHML
LQFRLAYVAPESRVVGAGDLVDEPKKIAVRYLRGYFLLDFFVVLPLPQVMILLVIPKYVG
LSTANYAKNLLRITVLLQYVPRIIRFVPLLGGQSASSANGFIFESAWANFVINLLMFVLA
GHVVGSCWYLFGLQRVNQCLRNACSASKIPSCDGFIDCGRGINIGKQNETNRQQWFDDSA
STACFDTVDGAFHYGIYVQAVLLTTEDNAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEV
LFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEQWMSHRRLPEDLRRRVR
RAERFTWAATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLR
QNLYISGSDILYPGGPVEKMVFIVRGKLESISADGSKAPLHEGDVCGEELLTWYLEHSSA
NRDGGKIRFQGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYES
PYWRTIAATRIQVAWRYRNRRLKRAGMSKLGDKCYSSARERGS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccaggagagagatgatattcctatgctacaaagaaatgttgagttaccaaag
tttcctcttagaagtacatcaatgtgcataccagttagggatgatgtatacgaagaagat
acatttataccccatactggtcctctgtttgttcaaccaccaacacaacctgcagcagtg
ggcattccgtttacaagtagagatgcactagatatgcctcctcgaccttcacaaggaaaa
caagtcaacaagccacatgcagtaatgccagaagaaattcaaggaaacaggtggtcttat
agtggagacattccaaagaatgaacacttgatgatgtctggacctttgggacaatgtgac
aatcctgattgtgtcaactgccctcctgcctgtaaaagcaaaaggcattttcacaaaggt
ccaaatacattagacagtaagttccaaatttttctttataagcatggtggtgggtggaag
aaggaaatcgagcatttcctctcacgcattccagttatgaacccacatgcaaaaattgtt
cagcaatggaatcagttctttgtgatatcatgcctggttgccatattcatcgaccccttg
tttttcttcctattatcagtagaaaagggtaacaaatgcattgtgttgaactggcatttt
gctacagcacttgcagttgtgagaagtctgactgatgctatttattttgtgcacatgctt
cttcagttcagactggcttatgtagctccagaatcacgagtagtgggagctggagattta
gtagacgaaccaaagaaaattgctgtccgttatcttcgtggatattttttacttgacttt
tttgttgtgcttccacttcctcaggtgatgatattgctagtcatccctaaatatgttggg
ttgtcaactgcaaattatgctaagaatttattgcgtatcactgttcttcttcaatatgtt
ccacggatcatcagatttgtaccattgcttggtggtcagtctgcctcatctgccaatgga
ttcatatttgagtcagcatgggctaactttgtgattaaccttctaatgtttgttctggcg
gggcatgttgttggttcatgctggtacctatttggattgcagagggtcaaccaatgccta
cgaaatgcgtgttctgcatcaaaaattccgtcttgtgatggttttatagactgtggacgt
ggcattaatattgggaagcagaatgaaacaaacaggcagcagtggtttgacgattcagcc
tcgacggcttgttttgacactgtggacggtgctttccactatgggatttatgtgcaggct
gttttgctaactacagaggacaatgctgttaaacgttatatatattcattattttggggt
ttccagcaaataagtacgctagccggcaatcttgtcccaagttacttcgcatgggaagtc
ctgtttactatggctattatcggtttggggttgttgctttttgcattacttattgggaac
atgcaaaattttctccaagctcttgggagacggagactagagatgcaacttaggaggcgt
gatgttgaacagtggatgagccacagacgcctgccagaagatttgagaaggagggttaga
cgtgcggaaaggttcacctgggcagctacccaaggggtgaatgaagaggagcttttaagt
aatttaccagaagatattcaaagggacatacggcggcatttctttagatttcttaacaag
gtccgattattcacattgatggattggcccatcttggacgctatatgtgataaactaaga
cagaacttgtatattagcggaagtgacattctttatccaggtggtccggttgaaaaaatg
gtcttcatagtgagaggaaagctggaaagcatcagtgcagatggaagcaaagctccgttg
catgagggtgatgtatgtggagaggagctcctcacgtggtatttggaacactcttcagca
aacagagatggtgggaaaatcagattccaaggtatgcgtttggttgctattcgaactgta
agatgtttaacaaatgttgaagcttttgtgctaagagcaagtgatcttgaagaagtaact
tcacaattttcgcgattcttgcgcaatccacgagtgcagggtgcaatcaggtatgagtca
ccctactggagaaccattgctgcaacccgtattcaagtcgcatggaggtatcggaacagg
cgattgaagcgagctgggatgtcgaagttgggcgataagtgttacagctccgcacgcgaa
cgtggctcgtga
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