Oryza brachyantha (malo sina): 102705634
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Entry
102705634 CDS
T02995
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102705634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102705634
03110 Chaperones and folding catalysts [BR:
obr03110
]
102705634
03029 Mitochondrial biogenesis [BR:
obr03029
]
102705634
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102705634
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102705634
Messenger RNA biogenesis [BR:
obr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102705634
Chaperones and folding catalysts [BR:
obr03110
]
Heat shock proteins
HSP60 / Chaperonin
102705634
Mitochondrial biogenesis [BR:
obr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102705634
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102705634
Exosomal proteins of other body fluids (saliva and urine)
102705634
Exosomal proteins of breast cancer cells
102705634
Exosomal proteins of colorectal cancer cells
102705634
Exosomal proteins of bladder cancer cells
102705634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-GeneID:
102705634
NCBI-ProteinID:
XP_040380777
LinkDB
All DBs
Position
6:complement(575672..581525)
Genome browser
AA seq
601 aa
AA seq
DB search
MASTFSATSTVGLMAAPTGIVSDKKPSSLSSVSSVSVASRPLNARFQRKCNFRVKAAKEL
YFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELED
PVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTA
KALVEELRKLSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSEN
NLYVVEGMQFERGYISPYFVTDSEKMSAEYENCKLLLVDKKITNARDLINVLEEAIRGAY
PILIIAEDIEQEALATLVVNKLRGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEV
GLSLDKADKSVLGTAAKVVLTKEATTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKL
NERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAR
VDAIKDTLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAAT
GQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAPVTNPMDNSGYG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaccttcagtgccacttctacggttggcctcatggctgctccaaccgggatt
gtatcagacaagaagccatcttctctatcttcagtgtcatctgtttctgttgctagccgg
ccacttaatgcacgctttcagaggaagtgcaacttcagagtaaaagcagccaaggagctg
tacttcaacaaggatggctcggctatcaagaagcttcagactggagtaaacaagcttgct
gaccttgttggagttacgctgggaccaaagggaaggaatgttgttttggagagcaagtat
ggttcccctaagattgttaacgatggtgttacagttgcaagagaggttgagctggaggat
cctgttgaaaatattggagctaagttggttaggcaagcggcagcaaagaccaatgattta
gctggagatggcacaactacttctgttgtgcttgctcaggggctgattgccgagggtgtt
aaggtcgttgcagctggtgctaatcctgtgcaaattacacgtggtatcgagaaaactgca
aaagcactagttgaagaactaaggaaattgtcaaaggaggttgaagacagtgagcttgca
gatgttgctgcagtcagtgctggcaacaattatgaaattggtaacatgatagctgaggct
atgagcaaggttggcaggaagggtgtggttacccttgaagaagggagaagttctgaaaat
aatctctatgttgtggagggaatgcagtttgagcgtggttatatctccccgtattttgta
actgacagcgagaaaatgtctgcagaatatgagaactgcaaacttcttttggtggacaaa
aaaatcaccaacgcaagggatcttatcaatgttttggaggaggccataagaggtgcatac
ccaattctgataattgctgaggacattgagcaggaggctcttgctactcttgttgtcaac
aagcttagagggtcattgaagattgctgctatcaaagcccctggttttggtgaacgcaag
acccagtacttggatgatattgccattctaactggagcaactgtgatcagggatgaagtt
gggttgtcacttgacaaggcagacaaatcagttttaggaacagccgcaaaggttgtcctt
acaaaagaggcaaccacaatcgtcggtgatggcagcacacaagaagaagtaactaagagg
gttgcacaaattaaaaatctcatcgaggctgctgaacaggaatacgagaaggagaaactc
aatgagaggatagcaaagcttgctggtggtgttgcagtcattcaggtgggagcacaaaca
gagactgaactaaaagagaagaagttgagagttgaggatgccctaaatgctaccaaggct
gctgttgaggaaggtattgttgttggtggagggtgcacccttctgagactggcagctaga
gttgatgctattaaggacaccctagagaatgatgagcagaaggttggagctgaaattgta
aggagggcgctgagctacccgcttaaattgattgccaagaatgctggtgttaatggtagt
gttgttactgagaaggttctttctaacgataacttcaagtatggttacaatgctgcaact
ggacagtacgaggatttgatggctgctggtatcattgaccccactaaggtggtgagatgt
tgtcttgagcatgctgcgtcggtggccaagacattcctcacatcggatgtcgtcgtcgtc
gagatcaaggagcctgagcctgcgcccgtcaccaacccgatggacaactccggctacggg
tactga
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