Oryza brachyantha (malo sina): 102705651
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Entry
102705651 CDS
T02995
Name
(RefSeq) DNA polymerase I A, chloroplastic
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102705651
03410 Base excision repair
102705651
03420 Nucleotide excision repair
102705651
03440 Homologous recombination
102705651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102705651
03400 DNA repair and recombination proteins [BR:
obr03400
]
102705651
Enzymes [BR:
obr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102705651
DNA replication proteins [BR:
obr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
102705651
DNA repair and recombination proteins [BR:
obr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
102705651
NER (nucleotide excision repair)
GGR (global genome repair) factors
102705651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
102705651
NCBI-ProteinID:
XP_015696148
LinkDB
All DBs
Position
8:complement(2999459..3008786)
Genome browser
AA seq
1031 aa
AA seq
DB search
MAVAPPPPSSAPAQQLRRFPPPPWLSSPFRRTRYLSRPAFAGGGRQDYSPSSGMGVSRTG
AFKLGLYANLNVKSSIQEWVDETRRIYFLRTTNNVKKNISNGTTPLRVGNLRHDPSEDLR
SSNYPSLYDLRERGPSNSIVNRNVDTDLAKHPVIYQSAHAVPAPFSIVNNDMKPLNTPNG
SSAEIPWHDSPTVDSSLPKVSKSETTLVVNKANVIPDKKEHKHIVRKVTPNIPDKTSLTS
EAINARKVLAAIYDKVLVVDNVESARSVVKLLTTKYRGFIHACDTEVANIDVKEETPVGH
GEVICFSIYSGHFDGQADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPSIKKVWHNYSFD
SHIIENCGIKLAGFHADTMHLARLWDSSRRTDGGYSLEGLTNDQRVMDTVLKDLPKTGKM
SMKTIFGRKKVRKDGSEGKIISIEPVEKLQREDRELWICYSSLDSMSTLKLYESLKNKLE
AKEWIFDGCPRGTMYDFYEEYWRPFGALLVKMETEGMLVDRAYLSEIEKAAVAERKLAAN
KFRNWASKYCPDAKYMNVNSDTQIRQLFFAGIENRNKLGETWPQSKTFKVPNDENIATEG
KKTSKSRTIKLFSIVEDLKIDMFTPSGWPSVSGDALRSLAGKIPTDHIYKIDDDQEFGED
GSNLELTEQDVEDSSPYGTAYEAFGGGKKGREACHAIAALCEICSIDKLISSFIIPLQGD
RISCNEGRVHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFVAAPGNTLIVADYG
QLELRILAHLTNCKSMLEAFKAGGDFHSRTAMNMYQHIRDAVEEKKVLLEWHPQPGQEKP
PVPLLKDAFGAERRKAKMLNFSIAYGKTAVGLSRDWKVSVREARDTLKLWYRDRKEVSAW
QKTQKALAFEKCEVYTLLGRSRQFPSMTHAGPGQKGHVERAAINAPVQGSAADVAMCAML
EIERNARLKELGWRLLLQVHDEVILEGPTESAEVAKAIVVDCMSKPFYGTNILKVDLAVD
AKYAKSWYAAK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgccgccgccgccgtcgtcggcgccggcgcagcagctccggcggttcccg
ccgccaccgtggctgtcgtctcccttccgccgcacccgctacctgtcgcgcccggccttc
gccggcggaggaaggcaagactattctcctagttcaggcatgggggttagcagaactggt
gctttcaagcttggattgtatgccaacttaaatgtaaaaagtagcatacaagaatgggtg
gatgaaaccaggaggatatatttcctcagaaccaccaataacgtcaaaaagaacatctct
aatggcactactcctttgcgggttggaaatctacgccatgacccctcagaagatctcagg
agttcaaactatccttccttgtatgatctaagagaaagaggaccatctaattcaattgta
aatagaaatgtcgatacagatttggctaagcatcctgtgatatatcagtcagcccatgct
gtgcctgccccattcagtattgtcaataatgatatgaaaccactgaacacacctaatggc
tctagtgcagaaatcccttggcacgattctcccacggtggattcttctctgcctaaagtt
tccaagtcagagacaactttggtggttaataaagctaatgttatccctgacaaaaaggag
cacaaacacattgtgaggaaagtgactccaaatatcccagacaaaacgtccttgaccagt
gaggcaataaatgcacggaaggtgcttgctgccatctatgacaaagttttggttgtcgac
aatgttgagtcagctaggagtgttgttaagctgcttactacaaagtacagaggctttatt
catgcatgtgacacagaggtggcgaatattgatgtcaaagaagagacaccagttggtcat
ggagaagtaatatgctttagtatctattcaggacattttgatggacaggctgattttgga
aatggcaaaacatgcatatgggtagatgtgcttgatggtggaagggatgttctaatggag
tttgctcctttctttgaagatccatctatcaaaaaggtttggcataactatagctttgat
agccatatcattgaaaactgtggaatcaagcttgctggatttcatgctgatacaatgcat
cttgcacgcctatgggattcttccaggagaactgatggtgggtattcacttgaaggacta
acaaatgatcagagagtcatggacactgttctgaaggatttacctaaaactggaaagatg
tcaatgaaaactatctttggtcggaaaaaggtcaggaaagatggatcggaagggaaaatc
atatccattgagccagttgaaaagttacaaagggaggatagagagttgtggatttgctat
tcttcactagattcaatgagtacattaaagctttatgaaagcttgaaaaacaagcttgaa
gcaaaggagtggatttttgatggttgccctagaggaacaatgtacgatttctacgaagag
tattggcgtccctttggtgcccttcttgtaaagatggaaacagagggaatgcttgttgac
cgtgcttacctttcagagattgagaaagctgctgttgctgaacgaaaattagctgcaaac
aagtttcggaactgggcatctaaatattgtcctgatgccaagtacatgaatgtgaatagt
gatactcaaattcggcaacttttctttgctggcatcgaaaatagaaataagcttggtgaa
acttggccacaaagtaaaacgtttaaagtaccaaatgatgaaaacatagctacagagggc
aagaagacttcaaagtctcgcacgatcaaacttttcagtattgtggaagatcttaaaatt
gatatgtttaccccgagtggctggccttcagtcagtggggacgcattgaggagtttggct
ggtaaaatacccacagatcatatatataagattgatgatgaccaagagtttggtgaagat
gggagcaatttggaacttacggagcaggatgtagaagactcttccccatatggaactgca
tatgaagcgtttggtggaggaaagaagggaagggaagcatgtcatgccattgctgctcta
tgtgaaatctgctctattgacaagttgatatccagcttcattattccattgcagggagat
cgtatatcatgtaatgaagggcgcgttcactgttctttaaatataaatactgaaactgga
cgtttgtcagcacgaacaccaaacttacagaatcaacctgctcttgaaaaggataggtat
aagattcgccaagctttcgtggcagctccaggaaacacacttattgttgctgattatggc
caactggaactgaggatcttagcacatcttactaattgtaaaagcatgctggaagctttc
aaggctggcggtgactttcattctaggacagccatgaatatgtaccagcatattcgtgat
gctgttgaagaaaagaaagttctgcttgaatggcatcctcaaccaggtcaagagaaaccc
ccagtgccattattgaaggatgcttttggtgctgagaggaggaaagctaaaatgctcaat
ttctccattgcatatggaaagactgctgttgggctatctcgggattggaaggtttctgtt
agggaggcaagggatacactcaaactttggtatagagatagaaaggaagtttcagcttgg
caaaagacacagaaagcgcttgcatttgaaaaatgtgaagtttacactttgctcgggcgg
tcacgccagtttcctagcatgactcatgcaggtcctggtcaaaaaggtcatgtcgagcga
gctgccataaatgcacctgtgcagggcagtgcagcagatgttgctatgtgtgcaatgctt
gagatagaaagaaatgctcgcctcaaggagcttggttggagactcctgttgcaggtccat
gatgaagtgatattggaagggcctacagaatctgctgaagtggccaaggccatcgtcgta
gattgcatgtccaagcctttctatggaaccaacatcctgaaggtcgacctagctgtcgac
gccaagtatgcgaagagttggtatgctgccaaatag
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