Oryza brachyantha (malo sina): 102705658
Help
Entry
102705658 CDS
T02995
Name
(RefSeq) PHD finger protein PERSISTENT TAPETAL CELL 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102705658
Transcription factors [BR:
obr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102705658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
Znf_SCAND3
PHD_2
Motif
Other DBs
NCBI-GeneID:
102705658
NCBI-ProteinID:
XP_006660674
UniProt:
J3MXZ6
LinkDB
All DBs
Position
9:10558488..10561208
Genome browser
AA seq
681 aa
AA seq
DB search
MAKMVISLGSSRRRKRGEMVFRFEAFCQPGYPAQFAGAGGFRDDVRTLLGFAHLEAGVHG
ETKCWSFQLELHRHPPTVVRLFVVEEEVAASPHPQCHLCRHIGWGRHLICSKRFHFVLPR
RESAAEADGLCFAIDHGGAGPGKASSKGTTTAAATASARGHLLHGVVHLNGYGHLVALHG
LEGGSDFVSGHQIMDLWDRICSALHVRKVSLVDTARKGHMELRLLHGVAYGESWFGRWGY
RYGRRSYGVALPSYQQSLHALSSMPLCVLVPHLSCFSQELPMVVTKYQAISGHKLLSLGN
LLRFMLELRTRLPATSVTAMDYRGIMSEASCRWSAKRVDMAARAVVDALRRAEPPARWVT
RQEVRDAARAYIGDTGLLDFVLKSLGNHIVGNYVVRRTMNPVTKVLEYCLEDVSSVLPAV
AGGVPSQGKMRVRFQLTRAQLMRDLVNLYRHVLKEPSQALTTGAFGAIPVAVRMVLDIKH
FVKDYHEGLAATSNGGFGHPHINLCCTLLVSNGSSELVPPYETVTLPAHATVGELKWEAQ
RVFSEMYLALRSFTADSVVGVGADQEGSPVLGLVDVGSAVVVQGNVGEQQPQQQERNGEG
HETDPRKAAAAVCEGSGGERESVVDCACGADDDDGERMACCDICEAWQHTRCAGIADTED
VPHVFLCNRCDNDVASFPSLH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatggtgatcagcctggggagctcgcggcggaggaagcgcggcgagatggtg
ttccggttcgaggccttctgccagcccggctacccggcgcagttcgccggcgccggcggc
ttccgggacgacgtgaggacgctgctcggcttcgcgcacctggaggccggcgtgcacggc
gagaccaagtgctggtcgttccagctcgagctgcaccgccacccgccgaccgtcgtgagg
ctcttcgtcgtcgaggaggaggtcgccgcctcgccgcacccgcagtgtcacctctgccgc
cacattgggtgggggaggcatctgatatgcagcaagaggtttcacttcgtgctgccgagg
agggaatccgcggcggaagccgacggcctgtgcttcgcgatcgaccacggcggcgccggc
ccggggaaagcgtcgtcgaaagggacgacgacggcggcggcgacggcctccgccaggggc
cacctgctacacggcgtcgtgcacctcaacggctacggccacctcgtcgccctccacggc
ctcgagggcggctccgacttcgtctccggccaccagatcatggacctctgggaccgcatt
tgctcagccttgcacgtaaggaaggtgagcctggtggacacggcgaggaaggggcacatg
gagctgaggctgctgcacggcgtcgcgtacggcgagtcgtggttcgggcggtgggggtac
aggtacggccggcggagctacggcgtggcgctgccgtcgtaccagcagtcgctacacgcg
ctgagctccatgccgctctgcgtgctggtgccgcacctgtcgtgcttcagccaggagctc
cccatggtggtcaccaagtaccaggcgatcagcggccacaagctgctcagcctcggcaac
ctcctccgcttcatgctcgagctgcgcacccgcctgccggccacctccgtcacggcgatg
gactaccggggcatcatgtcggaggcctcgtgccggtggtcggcgaagcgcgtcgacatg
gcggcccgcgccgtggtggacgcgctccgccgcgccgagccccccgcgcggtgggtcacg
cggcaggaggtgcgcgacgcggcgcgcgcctacatcggcgacacgggcctcctcgacttc
gtgctcaagtccctcggcaaccacatcgtcggcaactacgtcgtgcgccgcaccatgaac
ccggtgaccaaggtgctcgagtactgcctcgaggacgtctccagcgtgctcccggcggtc
gccggcggcgtgccgagccaggggaagatgagggtgcggttccagctcacccgggcgcag
ctcatgagagacttggtgaacctgtaccgccacgtgctcaaggaacccagccaggcgctc
accaccggcgcgttcggcgccatcccggtggccgtccggatggtcttggacatcaagcac
ttcgtcaaagattaccacgaggggctcgccgcgaccagcaatggcggattcgggcatccc
cacatcaacctgtgctgcacgctgctggtgagcaacgggagctcggagctggtgcctccg
tacgagacggtgaccctgccggcgcacgcgacggtgggcgagctgaagtgggaggcgcag
agggtgttcagcgagatgtacctcgccctgaggagcttcacggccgactccgtcgtcggc
gtcggcgccgaccaggagggcagcccggtgctcgggctggtcgacgtcggaagcgccgtc
gtcgtccaaggtaatgtcggcgagcagcagccgcagcagcaggaacggaacggggagggc
cacgagacggacccgaggaaggcggcggcggccgtgtgcgaggggagcggcggcgaacgc
gagagcgtcgtcgactgcgcgtgcggcgcggacgacgacgacggcgagcgcatggcgtgc
tgcgacatctgcgaggcgtggcagcacacgcggtgcgccgggatcgcggacaccgaggac
gtcccgcacgtcttcctctgcaaccggtgcgacaacgacgtcgcgtcgttcccgtccttg
cactga
DBGET
integrated database retrieval system
