Oryza brachyantha (malo sina): 102705916
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Entry
102705916 CDS
T02995
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102705916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102705916
04121 Ubiquitin system [BR:
obr04121
]
102705916
03036 Chromosome and associated proteins [BR:
obr03036
]
102705916
03400 DNA repair and recombination proteins [BR:
obr03400
]
102705916
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102705916
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102705916
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102705916
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102705916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
102705916
NCBI-ProteinID:
XP_015692640
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All DBs
Position
5:complement(15834816..15838579)
Genome browser
AA seq
577 aa
AA seq
DB search
MEKVAAVTNLEILQRIHMDSNSLTRESRSLSKSCLLRNKGALPAKGSNEKNMADPNEVSS
PSVSLNNSGLHEHSDRHTNTPRKHGNAGMSKDNRSATGFKRLQTPINLFEDECIFCHSFR
TSQFHGPMVHYRKGKLVSSDNDSPSDIIYVHKKCMEWAPRVYYKGDTVVNMEMEISRASK
LKCTRCRHPGAALGCYYKHCNRSYHVPCAVMTLDCRWDVDNCFVMCPEHASEALPCDKVS
SPTKENGNSSSISQSQSSIEQRNSTGCERKDCIIDQRNISSSLPQRQSSAKEGISAVHKR
EIDQPDTSCASFPQGQYLDKEVIYTEDWRKQKQNHLYTERNCPSDLWVLLGSALSPSEKD
SLKEFASWTNATVANEWTENVTHVIVGKSGDSACSRSYEVLMALLFGKWVLTIGWIMNSM
EELIPSPESSFELRFSHDSRTSIGGNKKGRNQASEGAQKLFSGLNFCLSAYINPDDRKHI
QNLIAAAGGQVLKISGSHSVRENLEKAPAEPLYFVFDGGAPREFTPSLLDDLPKEMEEGI
EHAACGAQVISHLKLFDTIAASDAHILNHKDHFTPYV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtagcagcagtaactaatcttgagattcttcaaagaattcatatggacagc
aattcgttgactagggaaagtaggtctctgagtaaatcatgtcttcttaggaacaaggga
gcattgcctgcaaagggttcaaatgagaaaaatatggcagatccaaatgaagtttcatcg
ccttctgttagtctaaacaacagtggactgcatgagcattctgatagacacaccaacaca
cctagaaaacatggcaatgctggcatgtcaaaagacaacagaagtgctactggattcaag
agactacaaacacccatcaacttatttgaagatgaatgcattttctgccattcatttaga
acaagtcagtttcatggtccaatggtgcattatcgaaagggaaagcttgtgtccagtgac
aatgacagcccatcagatatcatctatgtccataagaaatgcatggagtgggccccaaga
gtatattacaaaggtgacactgttgtgaacatggagatggaaataagtcgtgcctcaaag
ttgaagtgcaccagatgcaggcatccaggagcagctcttgggtgttattataagcattgc
aataggagctatcatgttccatgtgcagtgatgacattggattgccgctgggatgttgat
aattgttttgttatgtgcccagaacatgcatccgaggcactaccatgtgataaggtaagc
tcaccaacaaaggagaatggcaattcttcttccatctcacagagtcaatcatcaatcgaa
caaagaaattccactggttgtgaaaggaaagattgtataatagatcaacggaacatatca
agttctttgcctcaaagacaaagttcagccaaagagggaatttctgctgttcataaaagg
gaaatagatcaaccggacacttcatgtgcttcctttcctcagggccaatatttggacaag
gaagtaatttacactgaagactggaggaaacaaaagcaaaatcacctttacacagaaaga
aactgcccttcggatctgtgggttttgcttggttcagctttaagtccatccgagaaggat
tccttgaaggagtttgcatcttggaccaatgcaaccgttgccaacgaatggactgaaaat
gtgacccatgttattgttggcaaaagtggtgatagtgcatgtagccgatcatatgaggtc
ctgatggctctactgtttggaaaatgggttctcacgattgggtggattatgaattcaatg
gaagagttgattccaagtccagaaagttcctttgagttgagatttagccatgactcacgc
acatcaattggtggaaacaagaaaggaagaaatcaagcttctgaaggggcacagaagctg
ttctcgggactgaatttttgcctcagcgcctacataaaccctgacgacagaaaacacata
cagaacctgatcgcagctgcaggggggcaggtactgaagataagcggctcacattcggtg
cgtgaaaatctggagaaagctcctgcagagccgctatacttcgtctttgacgggggcgct
ccaagggagttcaccccaagcttgcttgatgatctccccaaggagatggaagagggcata
gagcatgctgcctgtggagctcaggtgatcagccatttgaaattgttcgacaccatagct
gcttctgatgcccatattctcaaccacaaggatcacttcaccccttatgtgtaa
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