Oryza brachyantha (malo sina): 102706282
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Entry
102706282 CDS
T02995
Name
(RefSeq) endoribonuclease Dicer homolog 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102706282
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102706282
microRNA pathway
RISC loading complex
102706282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
DND1_DSRM
Helicase_C
ResIII
dsrm
PAZ
Cas3-like_C_2
Dicer_dsRBD
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
102706282
NCBI-ProteinID:
XP_006653591
UniProt:
J3LZG8
LinkDB
All DBs
Position
4:complement(14055965..14073648)
Genome browser
AA seq
1633 aa
AA seq
DB search
MGDDAAPAAAAAGPTTAGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLL
IYELGHLIRKPSREVCIFLAPTIPLVRQQAMVIASSTDFKVQHYYGNGKSSRDHQEWEND
MRKYEVLVMTPQILLHSLRHCFIKMNSIALLIFDECHHAQAQKRHPYAQIMKEFYNSNSV
ERLPRVFGMTASPIIGKGGSNKLNYTKCINSLEELLHAKVCSVDNEELESVVASPAMEVY
FYGPVNHSNLTVAYSKELDSLKLQSERMLRDSLCDFKDSQKKLKSLWRLHENLIFSLQEL
GSFGALQAARTLLSFDGDKLDKREVDLNGNSSSFAHYYLSGATSILSRSITDGSHAGSFD
IETFEEPFFSDKFSVLINVLSRYRLQENMKCIVFVKRITVARAISNILQSLKCLDFWKCE
FLVGCHSGLKNMSRNKMDAIVERFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVA
SFIQSRGRARMTKSKYVVLLERGNQSHEKLLNGYIDGECIMNEEIDSRTSNDIFDCLAEN
IYRVDSTGASISTACSVSLLHRYCDNLPRDMFFTPSPAFFYIDGIDGIICRLILPPNASF
RQVDGQPCLSKDEAKRDACLKACIKLHKLGALTDFLLPGPGSRKNKVSTTNNSSNNKVED
ESLREELHQMLIPAVLKPSRLKLDCLLSLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEA
ETLQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAQKFQEMFLKILLDRSEFTSSHVILG
NDVTLEINSTFYLLLPIKQKCYGDKFMIDWPAVERCLSSPIFKAPKDVSVHDSYSPNKSL
RLLDGICSKTDVVGSVVFSPHNNIFFFVDAILDEINARSEYKDATYAEHFKERFGIELSQ
PEQPLLKAKQLFNLRNLLHNRLQETTESEGRELTEHFVELPPELCSLKVIGFSKDMGSSL
SLLPSLMYRLENLLVAIELKDVMSSSFPEASKISASGILEAITTEKCLERISLERFEVLG
DAFLKYVVGRHNFITYEGLDEGQLTRRRSDVVNNSNLYDLSIRRNLQVYIRDQQFEPIQF
FAPGRPCKVVCNSDVEVSLHQMNIHPDNRENCNMRCTKSHHWLHRKVIADVVESLIGVFL
VEGGFKAAFAFMHWMGIDADFNSSALYRVLDASSINLSLLDYTDIAELEELIDYKFKHKG
LLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPNLKPGQITDLRSLAVGN
DSLAYASVQKSIHRHLIKDSNHLTSAISRFEKYVKLSNSEKDLLEEPACPKVLGDIVESC
IGAVLLDSGFNLNNVWRVMLMLLKPVLTFSNMHTNPMRELRELCQCNGFELGLPKPVKAD
GEFHVRVEVNIKSKVIICTAANRNSKAARKFAAQETLSKLKSYGYKHRNKSLEEILVVAR
KRESELIGYNEDPIDVESDISVKIKSLHIHEERDANISFENTETSCTGSSKILSQRRAGH
IRPDNYDVDNGRNNQPKLAMQSGCLPSEATETSNKKVYHGDMVHKTARSFLFELCAANYW
KPPEFKLCKEEGPSHLPKFTYKVVVEIKGTSATLLECHSDAKHQKKAAQEHAAQGAVWCL
KQLGHLPKEGVRV
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacgccgccccggccgcggcggcggcggggccgaccacggcgggggagccg
aaggatccgaggacgatcgcgcgcaagtatcagttggatctctgcaagagggctgtggag
gaaaacatcatagtgtaccttggaacaggatgtggtaagacacacattgccgtgctgctg
atatacgagcttggtcacctcatccgcaagccaagccgtgaggtctgcatcttcctcgcc
ccaactatcccccttgtacgccagcaagctatggtgattgcaagttccactgatttcaaa
gttcaacattattatgggaatggtaaaagctcgagagatcatcaggaatgggagaatgac
atgagaaagtatgaggtccttgtaatgacccctcaaatcttattgcatagtttgcgtcat
tgtttcatcaagatgaactctattgcacttttgatatttgatgagtgccatcacgcacaa
gctcaaaaacgacatccatatgcacaaatcatgaaggaattctacaatagtaatagtgtt
gagagattacctcgggtttttggcatgactgcttcaccaattattgggaaaggtgggtct
aataaacttaattacacgaaatgtataaacagtcttgaggaattacttcacgcaaaggtt
tgttcagttgataatgaagaacttgaaagtgtggttgcgtctcctgctatggaggtgtac
ttttatggcccagttaatcactctaatcttactgtagcatacagcaaagagcttgatagc
ttaaagcttcagagcgagcgcatgctgagagatagcctatgcgatttcaaggattctcaa
aagaaactgaagtccttatggaggttgcatgaaaatcttatttttagtttgcaagaactt
ggttcttttggagctctgcaagctgcaaggaccttgctgtcctttgatggtgataagcta
gacaaaagggaggttgatcttaacggcaattcttccagctttgcacattactacctgagc
ggagcaacttctattcttagtcgcagtataacggatggttcccatgctggttcatttgac
atagagacatttgaagaacctttcttctcagataaattttctgttcttattaatgttctt
tcaagatacaggttacaggaaaacatgaaatgcattgtttttgtgaaaagaataactgtt
gcaagagcaatatcaaacattctccaaagcttgaagtgtcttgatttttggaaatgcgag
ttccttgtgggttgccactcaggattgaagaatatgtcaaggaataagatggatgctatt
gttgaaaggttttcttctggcgaggtgaatcttttggttgctacgagcgtaggtgaagag
ggacttgatatccagacgtgttgccttgttgtgcggtttgatcttccagaaacagttgct
agttttatccagtcaagggggcgtgcccggatgactaaatctaaatacgttgttctccta
gagaggggaaatcagtctcacgagaagttgcttaatggttatattgatggtgaatgcatt
atgaatgaagagattgactcaagaacttcaaatgatatatttgattgcctcgcagagaac
atttatcgagtggatagcactggtgcctccattagcactgcttgtagtgtatctctactg
catcgctactgcgacaaccttcctagggatatgttttttacaccttccccagcgttcttc
tacattgatggcattgacggaataatctgcagactaatacttccaccaaatgcttctttc
cgtcaagtggatggtcaaccatgtctatcaaaagatgaagctaagagagatgcatgcttg
aaggcatgcataaaacttcataaactgggtgctttgacagattttcttctaccaggtcca
ggttcaagaaagaataaagtatcaacaacaaataattcatcaaacaacaaagttgaagat
gaaagtctaagagaagagcttcatcagatgttaattcctgcagttctcaaaccttcaaga
ttgaagctagactgtttattgagcttgcacttctactatgttaaatttattcccatacca
gaagataggcgctaccagatgtttggcctctttgtgatcaacccccttcctgtggaagct
gaaacattacaagttgacttgcatcttgctcgtggcaggattgtgaaagcaggaattaag
catttggggaaaatagcgtttgagaaagaaaagatgatgcttgcacagaagtttcaagag
atgtttctgaagattctcctggacagatctgagttcacttcatcccatgttatattgggc
aatgatgttacattagaaattaattcaacattttacttgctgcttcccatcaagcagaaa
tgttatggcgataaatttatgattgactggccagcagttgagcgctgtttatcatcacca
atctttaaagcccctaaagatgtgtctgtccatgactcatattcaccaaataagtctctg
agacttcttgatggaatctgtagtaaaactgatgtggttggcagtgtagtatttagtccc
cacaacaacatctttttctttgttgatgccattctggatgaaataaatgctagaagcgag
tacaaggacgcaacttatgcagaacacttcaaggaaaggtttggtattgaactatcccag
cctgaacagccacttttgaaggctaaacagctcttcaacctgcgaaatttgcttcacaat
cggttacaggagaccacagaatcggagggtcgtgaattaacagaacacttcgtggagtta
cctccagaattatgttccttgaaggttattgggttttcaaaagatatgggcagttccctg
tccttactgccatctttaatgtatcgtttggagaatttgctggtggctattgagttgaag
gatgtgatgtcttcttcttttccagaagcttctaaaattagtgcttctggtatacttgaa
gcaattactactgagaaatgtttggagaggatctctttggagcggtttgaagtcctaggt
gatgctttcttgaagtatgtagttgggcgtcacaattttattacatatgaaggacttgat
gaagggcagttgaccaggagacgttctgatgtagtgaataattcaaatttatatgacttg
tcaatcagaagaaatttgcaggtatacatacgggaccaacagtttgaaccaattcagttc
tttgcaccaggaagaccttgtaaagttgtatgcaatagtgacgtggaagtgagtctacac
cagatgaatattcaccctgataatagagaaaactgtaacatgagatgtacaaagtcgcat
cattggctgcacagaaaagtgattgcagatgttgttgaatcacttattggagtatttctt
gttgagggtggattcaaagctgcatttgctttcatgcattggatgggaatagatgctgat
tttaatagttcggctctctacagagtgttagatgcaagctccatcaatttatctcttttg
gactacactgacattgccgagcttgaagaattgatagattacaagttcaaacataagggt
ctccttctccaagcattcgtacacccttcgtttagtcagcattctggaggctgctaccag
agactggagtttcttggagatgctgttttggagtatgtgataacatcatacctctactca
acttatcccaatctaaagcctggtcaaataacagatctaagatcattagctgttggtaat
gattcacttgcttatgcatcagttcaaaaatctatccataggcatcttataaaggattca
aatcatcttacgtcagcaataagtagatttgagaaatatgtgaagctctccaattcagag
aaagacttgcttgaagaaccagcatgtcccaaggttcttggtgatattgttgaatcttgt
attggcgcggtgcttttagattcaggcttcaacctgaacaatgtttggagagtaatgctt
atgcttctaaagccagtattgactttctccaacatgcatactaatccaatgagagaactt
agagagctttgtcagtgtaatggatttgagttaggccttcccaaacctgtgaaggctgat
ggagagttccatgtgagagtagaagttaacatcaagagcaaagtgatcatttgtactgca
gccaatcgaaattccaaagccgctagaaagtttgctgcacaagaaacactctctaaactc
aagagttatggatataaacatagaaacaagtcactcgaggagattttggttgttgctagg
aagagagaatcagaactcatagggtataatgaagatccaatcgatgttgagtctgacata
tctgtaaaaataaagagtctacatatacatgaagagagggatgcaaacatatcttttgaa
aatacagaaacatcttgtactgggagttctaaaattctcagtcaaagaagagcaggacat
atcaggcctgacaattatgatgttgataatggaaggaacaatcaacccaagttggcaatg
cagagtggctgtctgcctagtgaagcaacagagacaagcaataaaaaggtctatcatggt
gatatggtacacaagactgcaagatcattcctttttgaactatgtgctgcaaattattgg
aaacctcctgaattcaagttatgtaaagaggaaggcccaagccatcttccaaagttcaca
tacaaggtggtcgttgagataaagggcacttcggcgacccttttggagtgtcacagcgat
gccaagcatcagaagaaggctgcacaagagcatgcggcacaaggggcggtttggtgtctc
aagcaacttgggcacctaccaaaagagggcgttcgtgtgtaa
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integrated database retrieval system