Oryza brachyantha (malo sina): 102706294
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Entry
102706294 CDS
T02995
Name
(RefSeq) protein argonaute 1D
KO
K11593
eukaryotic translation initiation factor 2C
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102706294
03036 Chromosome and associated proteins [BR:
obr03036
]
102706294
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102706294
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102706294
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102706294
microRNA pathway
RISC loading complex
102706294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
102706294
NCBI-ProteinID:
XP_006656523
UniProt:
J3MHV1
LinkDB
All DBs
Position
6:21849307..21857206
Genome browser
AA seq
1038 aa
AA seq
DB search
MGSRRPRLPGFGEDSQAAEPRGGGRGGGRGRGSTYPQQYHHPQGQGGYYQYQGHAAAAAA
PQPRGAMVVQKWRPAGAAAEHLGHQHPYSSSVRPQHYSGPSAIAPELRQAMDAPHEPDHI
SSPEAASPETSPPRSLALEVTEQLQDLSVKDQLSASQEIVQAIPVSTKSFKFPHRPGSGS
IGTRCLVKANHFFAELPDKDLHQYDVSITPEITSRIRSRAVMEELVKLYKPSYLGGRLPA
YDGRKSLYTAGPLPFTSKEFHISLLEEDDGSGSERRQKTYKVVIKFAAKADLHRLEQFLA
GRQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGRRRSLGEGLESWRGFYQSIRP
TQMGLSLNIDMSATAFFEPVPVIDFVIQLLNTDIRSRPLSDAERVKIKKALRGVKVEVTH
RGNMRRKYRISGLTSQSTRELTFPVDQGGTVKSVVQYFQETYGFAIQHTYLPCLQVGNLQ
RPNYLPMEVCKIVEGQRYSKRLNQSQIRALLEETCQRPHDRERDIIQMVNHNSYHEDPYA
KEFGIKISERLASVEARILPAPRLKYNETGKEKDCLPRVGQWNMMNKKMVNGGRVKSWIC
VNFARNVQESVASGFCRELARMCQASGMDFALEPVLPPMFARSDQVERALKARFHDAMNI
LGPQHKELDLLIGLLPDNNGSLYGDLKRICEIDLGLVSQCCCTKQVFKMNKQILANLALK
INVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIASVVASQDWPEV
TKYAGLVSAQSHRQELIEDLYNITHDPHRGPICGGMVRDLLISFKRSTGQKPQRIIFYRD
GVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRS
GNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLC
YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDSSDSGSMASGRGGSSTSRSTRAAGGGA
VRPLPALKDSVKNVMFYC
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaaggagaccaagactgcctgggtttggtgaggactcgcaggctgctgagcct
cggggtggtgggagaggaggtggccgtggccggggcagcacataccctcagcaataccac
cacccacaaggacaaggtggctactaccagtaccagggacatgctgctgctgctgctgct
cctcaaccccgcggtgcaatggtggtgcagaagtggcgtcctgctggtgctgctgcagag
cacttgggccatcaacatccctacagcagcagtgtgaggccacagcactactctggtccg
tctgccatagctcccgagctgcgccaagcaatggatgctccacatgagcctgatcatatc
tcctcaccagaagcagcctctccggagacatcaccaccacggtctcttgctcttgaggtc
acagagcagcttcaggacttgtctgtcaaggaccaattgagtgcgagtcaggagattgtc
caagcaattcctgtgtccaccaaatcatttaaatttcctcaccgccctggaagtggaagt
atcggaaccagatgtttggtgaaggcaaatcacttctttgctgaactgccagacaaggat
ctccatcagtatgacgtttcgatcaccccagaaattacatcacgaattcggagccgtgca
gtgatggaagagttggtgaaactttataagccatcttatttgggaggacgtcttccagct
tatgatggtaggaagagcctttacacggctggtccattgccgtttacttcaaaagaattt
cacatctctttgcttgaggaagatgatggttctggctcggagaggcgtcagaaaacttat
aaggtagtgattaagtttgctgcaaaagccgatcttcaccgtctcgaacaatttctagct
ggaaggcaggcagaggctcctcaggaggccttgcaagttcttgatattgtgttgcgagag
ttgccaacagcaagatatgcaccgtttggtcgatccttcttctctcctgacctagggagg
agacgatctcttggggagggattagaaagctggcgtgggttttatcagagcattcgccct
actcaaatgggcttgtcactgaatattgatatgtcggcaactgctttctttgaaccggta
ccagtcatagattttgtcatacagcttttaaatactgacatccgctcaaggcccttgtca
gatgctgaacgtgtcaagatcaagaaggccttaagaggagtgaaggtagaagtcactcac
cgtggcaacatgcgccggaagtatcgaatatctggtttaacatctcagtcaactcgggaa
ctaacttttcctgttgatcaagggggcacggtgaagtctgttgtacaatattttcaagag
acatatggatttgccatccagcacacatatcttccatgtctgcaagttggaaatctgcag
cgtccaaattacctaccaatggaggtctgcaaaatagtggaaggacagaggtactcgaag
cgactgaaccagagtcagataagggcccttttagaggagacatgtcagcgcccacatgat
agggagcgtgacataattcagatggtgaatcacaactcataccatgaagatccttatgca
aaggagtttggcattaagatcagtgagcgtctggcctcggttgaggcacggattttacct
gctcctcggctgaagtataatgagactggcaaagagaaggattgcttgcctagagttggt
cagtggaatatgatgaacaagaaaatggtaaatggtggtagagtcaagagctggatatgt
gtcaattttgctcgaaatgtgcaagagagtgttgctagtggattttgtcgtgaacttgct
cgcatgtgccaggcttcaggaatggactttgctttggagcctgttcttccacctatgttt
gcacgttctgatcaagtggaacgagctttgaaagccaggttccatgatgcaatgaacata
cttggaccacagcacaaggagctcgatttgcttattggattgcttcctgataacaatggt
tccctttatggtgatttgaagcgtatctgtgaaattgaccttggattagtttcccaatgc
tgctgtacaaagcaagtgtttaaaatgaacaaacagatcctggcaaatcttgctctgaag
ataaatgtgaaggttggggggaggaacactgtactggttgatgcggtgtcgagacggatt
ccattggtcactgacagacctactattatatttggtgctgatgtcacccatcctcaccct
ggcgaagatagcagcccttccattgcttctgttgtggcctcccaggattggcctgaggtg
acaaagtatgctggtttagtctcggcccaatctcacaggcaggagttaatagaggatcta
tataacatcacgcatgatcctcatagaggacccatctgcggtggaatggtcagggatctt
cttatatccttcaaaagatcaactggtcaaaagcctcaacggataatattctatagggat
ggtgtcagtgaaggtcagttttatcaggttctattgcatgagcttgatgcaatccgaaag
gcttgtgcatcgctcgaagcaaattaccaaccgcaggtgactttcattgtggttcagaag
cgccaccacacgagattatttgcacacaaccacaatgatcagaattcagtcgacaggagt
ggaaacatactgcctggtaccgttgttgattccaagatttgccatcctaccgagtttgac
ttcttcttgtgcagccatgctggcatcaagggcacaagccgtcctgctcattaccacgtc
ctgtgggatgaaaacaacttcacagctgatgcgttgcagactctgactaacaacctctgt
tacacttatgcgaggtgcacacgatccgtatccattgttccaccagcatattatgctcat
ctggcggcctttcgggcccgtttctacatggagccagatagctcggatagtggttcaatg
gcaagtgggcgtggagggtcgtctacatcgcgcagcactcgtgcagcaggtggtggtgcc
gtcaggcccctccctgcactcaaggacagcgtcaagaatgtcatgttctactgttag
DBGET
integrated database retrieval system
