Oryza brachyantha (malo sina): 102706454
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Entry
102706454 CDS
T02995
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102706454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102706454
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102706454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
102706454
NCBI-ProteinID:
XP_006649658
UniProt:
J3LLI6
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All DBs
Position
3:5533585..5544203
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AA seq
1468 aa
AA seq
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MAWAEDEAIGPDVASAGLHVSERIGRDAAAQPDLEEALEASRYASHPYSSHPKEWPPLVE
VAETRQLPPMLVERYNAAAGEGTALCGIFSEIHRAWATVDNSFFIWRFDKWDGQCQEHNA
DEQVICAVGLARAKPGVFVEAIQYLLVLATPVELILVGVCCSASGDGTDPYAELSLQPLP
EYIISTDGVTMTCITCTDNGQIFLAGRDGHIYELQYTTGSGWRKRCRKVCLTTGLGNLLS
RWVLPNAFKFSAVDPIVDMVIDEERNTIYARTEGMKLQLFDLGANGDGPLRKITEEKNLV
DPRDAPYGSRRPNAQRAARSPKPSIVCIAPLSAMESKWLHAVAVLSDGKRLFLSTSGGSS
SVGLSTGLQRPSCLKIVATRPSPPLGVGGGLTFGAVSAAGRAQPEDLALKVESAFYSSGA
LIMSDSSASAMSSLLAVQKDSAAQLSLPSTFGTASSSSRALRETVSALPVEGRMLCASDV
FPLPDAAFIMQSLYADVECFSAFGKPSEKSSIKLWAKGDLPTQHILPRRRIVVFNTMGLM
EVVFNRPVDILRKLFDGNTLRSQLEEFFSRFGTGEAAAMCLMLAAKLLYAEDSLISNAVS
EKAAEAFEDPGLVGMPQIDGSTALSNTRTQAGGFSMGQVVQEAQTIFSGAYEGLCLCSSR
LLYPIWELPIMVVRGLVGSNDSGDGVVVCRLSTGAMKVLESKIRSLETFLRSRRNKRRGL
YGYVAGLGDSGSILYKAGPSSGKSPYSSRIRDVDPIDQSASSKKQRLPYTSAELAAMEVR
AMECLRRLLRRSGEALFLLQLICQHNVARLVQTLGNDLRKKLVQLTYHQLVCSEDGDQLA
MRLISALMEYYIGPEGRGTVDEVSTKLREGCPSYFNESDYKYYLAVECLERASMTNNHDE
KDVLARDAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQKAQALDSNADVINGQID
ARHHDTITAQREQCYKIVMNALRTLKGVGQSGTQGADKSSGSVTALDPASRGKYIRQIIQ
LSVQWPDTMFHEHLYRTLIELGLENELLQYGGSDLVTFLQTAGRKHHEEVQGLPVVASKG
SNPNNLDAPISTSQTKYLELLARYYVHKGEHIAAARMLLILAERQCSSAEEAPTLDQRYQ
YLSNAAIQAKSAGITVDSSRNPIDSSTVDLLEGKLAVLRFQMQIKQELEFMSSRLENLPG
SSELPNDPFPHDNILADVESARFAMDKAKELSLNLKSITQLYNDYAVPFNLWEVCLEMLN
FANYSGDADSKIVREIWARLLDQALTRGGVAEACSVVRRVGSKLDPADGACLPLDIICLH
LEKAALDRVSSEEELVGDEDVARALLGACKDLPEPVLAVYDQLLSNGAIVPSLNLKLRLL
RSVLAILREWGMSVIAHKLGTTTAGASFFLDGTFSLNQTGSLNQGVRDKIISLANRYMTE
VRRLNLPQNQTENVYRGFRELEEKLLSH
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggcggaggacgaggcgattggccccgacgtggcctccgcggggctgcacgtc
tcggagcggatcgggcgtgacgccgccgctcagcccgacctggaggaggccctcgaggcc
tcgcgctacgcctcccacccctactcctcgcaccccaaggagtggcctcctttggtggaa
gtagcagaaactaggcagttacctcctatgctggttgaaagatataatgcagctgctggt
gaaggaacagctctttgtggaatattttctgaaatacaccgtgcctgggcaactgttgac
aattcattttttatttggcgctttgataagtgggatgggcagtgtcaagagcataatgcg
gatgaacaagtgatttgtgctgttggccttgctagagcaaagcctggagttttcgttgaa
gccatccagtaccttttagtattggcaactcctgttgagctgatacttgttggagtttgc
tgttcagccagtggtgatggaactgatccatatgcagagctctcattgcaacctttacct
gagtacattatttctactgatggtgtcacaatgacatgcatcacttgtacagataatggt
caaattttcctagctggacgtgatggccatatatatgagttgcagtatacaactggttca
ggctggcgtaagcgctgccgtaaagtttgccttacaactggtttaggcaaccttctttcc
aggtgggttttgccaaatgcattcaagttctcagctgttgatcctatcgttgacatggtt
attgatgaggagagaaatacaatttacgcacgcacagaaggcatgaaattgcagctattt
gatttaggagctaatggcgatggtcccctgagaaagatcactgaagaaaaaaatcttgtt
gatccacgagatgcgccttatggcagtcggaggcctaatgcacaaagagctgcacgatcc
ccaaaaccatcaattgtctgcattgcacctctgtcagccatggaatcaaaatggcttcat
gctgttgcagttttatcggatggcaagaggctgttcctttctacatcaggtggtagtagt
tctgttggactgagcactggtttgcagaggccaagctgtttaaaaattgttgctaccagg
ccttccccacctctaggggttggtggtggtctcacatttggtgccgtttcagctgctggc
agagctcagcctgaggatctagctttaaaagtcgagtctgctttctattcctccggtgct
cttataatgtcagattcatctgcttcagctatgtcatcccttcttgctgtgcagaaagat
tcagctgcccagttatccctacccagtacctttgggacagcatctagtagttcaagggct
ctgcgagaaacagtttctgctttgcctgttgagggtcgaatgctttgtgcctctgatgtc
ttcccacttccagatgctgctttcattatgcagtctttatatgccgatgtggaatgcttt
tcagcttttggaaaaccttctgagaagtcatccataaaactgtgggccaaaggagatctt
cctacccagcatatcttacctcggaggaggattgttgtattcaatactatgggtttgatg
gaggtagtttttaatagacctgttgacatcctaagaaaattgtttgatgggaacaccttg
agatctcaattagaagaattctttagccgttttggcactggagaggctgcagcaatgtgc
ttaatgctagcagctaagctgctttatgctgaagatagcctgataagcaatgcagtttct
gagaaagctgctgaagcatttgaggacccagggcttgtcgggatgcctcaaatcgatggc
agcactgctttgtctaacactcgaactcaggctggaggctttagcatgggacaagttgtt
caagaagcacaaactatattttctggtgcatatgaagggctttgcttatgctcttctaga
ttattgtatcccatctgggaacttccaattatggtggttcgaggactggtaggttccaat
gattctggtgatggtgtggttgtttgcaggctttctactggagccatgaaggttcttgag
agcaagatccgttcattggaaacatttttgaggtcaagaaggaacaagagaagaggactt
tatggttatgttgctggcctaggcgattctggttccatactgtacaaagcaggacctagc
agtgggaagagtccatacagctcccgcattagagatgttgatccaatagatcagtctgca
tcaagtaaaaagcaacggctgccttacacatcagcagaactagctgcgatggaggtgagg
gcaatggagtgtcttaggcggttgcttcgaagatctggtgaagcactttttctgcttcaa
cttatttgccagcataatgttgctcgcttggttcagacacttggtaatgatttgcggaag
aaattagttcagttaacatatcatcaattggtatgttctgaggatggtgaccagcttgcc
atgcgccttatttctgcactcatggagtactatattggcccagagggcagaggaactgtt
gatgaggtcagcactaaattgagagagggttgtcctagttacttcaacgagtcagattat
aaatactacttagcagtggaatgtcttgagagagcatctatgacaaacaaccatgatgag
aaagacgtccttgctagagatgccttcaatcttttaactaaaattcctgactctgctgac
ttgagtgctatatgcaagagatttgagaacctaaggttctatgaggcagtagtgcgtttg
cctttacagaaagctcaagcacttgattccaatgctgatgttattaatgggcaaattgat
gcaaggcatcatgatactataactgcacagcgtgaacagtgctataaaatagtcatgaat
gctctacgaaccctcaagggtgttggacagagtggcacacaaggtgcagacaagtcgtct
ggttcagttactgcacttgatccagcttctcgaggcaaatatattagacagattatccaa
ttaagtgttcagtggccagacacaatgtttcatgagcatctgtataggacccttattgag
cttggtttggaaaatgaacttctgcaatatggaggttctgatctggttacttttctccag
accgctggtcgtaagcatcatgaagaggttcaaggacttcctgtggttgcatcaaaaggc
tctaacccgaacaatttggatgcacctatttccactagtcaaacaaagtatcttgagctg
ctagccaggtattatgttcacaagggggagcatattgctgctgctagaatgttgttgata
ttggcagaaaggcagtgctccagtgcggaagaagctccaactcttgaccagaggtatcaa
tatctgagcaatgcagccattcaggccaaaagtgcaggcattactgtggattcttcgagg
aatcctattgatagcagcacagtagatctacttgaaggcaaacttgcagttcttcggttc
caaatgcaaatcaagcaagaactagagttcatgtcttcacgacttgaaaatttgccagga
agttctgaattaccaaatgatccctttcctcatgataacatcctagctgacgtggagtct
gctagatttgccatggacaaggctaaagagctttcactgaatcttaagagtatcactcaa
ctttataacgattatgctgttccttttaatctttgggaggtttgcctggaaatgctcaac
tttgcaaattattctggagatgctgacagtaagattgttcgagaaatttgggccaggctc
cttgaccaagcacttacaagagggggtgttgcagaagcatgttctgtggtgagaagagta
ggttcaaaacttgatcctgcagatggagcatgtttaccattggatataatatgccttcat
ctcgagaaggctgcactggatagagtaagctcagaagaagagttagttggtgacgaggat
gttgcaagagcccttcttggagcctgtaaagatctacctgaacctgtgcttgctgtgtat
gaccaactgttatcaaatggcgctattgtgccctccctaaatctgaagctgcggcttctg
agatcagtccttgcaatccttcgtgaatggggcatgtctgtcattgcacataaactaggc
accacaactgctggggcttcattctttcttgatggaacattttcgctgaatcaaacagga
tctttaaatcaaggcgttcgagataaaataattagtttggcaaacaggtatatgactgag
gtgaggcggttaaaccttccacagaaccaaacagagaatgtctatcgaggtttcagagag
ctagaggagaaattgttgtctcattag
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