Oryza brachyantha (malo sina): 102707002
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Entry
102707002 CDS
T02995
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102707002
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102707002
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
102707002
NCBI-ProteinID:
XP_006647748
UniProt:
J3LG71
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All DBs
Position
2:21767578..21770854
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AA seq
791 aa
AA seq
DB search
MASTSPCAAPSPSLRCPLALSHPFASPPPPPPAFRLAAPKLLPGRLAVSSPGIPAVASAL
ESLVLDLEDEEEDEDEETESGLFQGEAWAAADERDAVRSPELVVPELGELPEQWRRSRIA
WLCKELPAYKHSTFTRILNAQRKWINQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFR
FNFALATRVADCLGRDGKVEKCQEVFEAIVKQGRVPAESTFHILIVAYLSVPKGRCLEEA
CTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLRQAEFVYHNLVTTNLDVHKDV
YAGLIWLHSYQDIIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVEETEATWRD
ILQSGSDLPAQAYVCRMEVYAQAGEPMKSLDMFKEMKEKNIPPNVASYHKIVEIMTKAWE
VDIAEELMNEFIESNMKHLMPAFLDLMYMYMDLDMHEKLELTFSKCIARCRPNRILYTIY
LESLVKVGNIEKAEEVFGEMHSNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMNKKK
YDVHADSLEKLQAGLLLGKKVIKPKAVNMKLDQEQREILIGLLLGGTRMESYAQRGVHIV
HFQFQEDSNAHSVLRVHIHERFFEWLPSASRSFDDGSKIPYQFSTIPHQHFSFFADQFFL
KGQHVLPKLIHRWLSPRVLAYWFMFGGSRLPSGDIVLKLSGGNSEGVERIVNSLQAQSLT
SKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNSFASSTMQEGSSIGFSGAQDTDTNFDDD
VHNKYHTESDE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacctctccctgcgccgcgccatctccatcgctacgatgccctctcgcgctc
tcccaccctttcgcttctcctcctcctcctcctcccgccttccgtctcgctgccccgaag
cttctccccggccgcctcgccgtgtcctcgccagggatcccagcggtagcgtcagcgctg
gagtccctagtactggatttggaagacgaggaggaggatgaggatgaggagactgagtcc
gggctgttccagggagaggcgtgggcggcggccgacgagagggatgcggtcaggtcaccg
gagctggtggtgcccgagctgggggagctgcccgagcagtggcgccgctcaaggatcgcc
tggctctgcaaggagctccccgcctacaagcactccaccttcacccgcatcctcaacgca
cagcgcaagtggatcaaccaggacgacgccacctacgtcgccgtccactgcctccgcatc
cgcaacaacgacgctgccttccgggtgtatagctggatggtgcggcagcattggttccgc
ttcaactttgcactagccactagggttgcagattgcctggggagggatggaaaggttgag
aaatgtcaggaggtgtttgaggcgatagtcaagcagggccgtgtacctgccgagtccacc
ttccacatactgattgttgcatacctcagtgtacctaaagggcgttgtcttgaggaggca
tgcactatctacaaccagatgatacagatgggtggttacaagcctcgccttagccttcat
aattccttgttccgtgcgcttgtgagtaagacaggaggaactgccaagtacaacctcagg
caggctgagtttgtgtaccataatctggtcactaccaatcttgatgtgcacaaggatgtc
tatgctgggctaatctggcttcacagctaccaggacatcatcgatagagaaaggataata
gctcttaggaaggagatgaaacaagcaggctttgatgagggtattgatgtgctggtgtca
gtaatgagggccttttcgaaggaagggaatgttgaagaaacagaggccacatggcgtgat
attcttcagagtggttctgaccttcctgctcaggcctatgtgtgccgaatggaggtttat
gcccaggctggtgagcctatgaaatcccttgatatgttcaaggaaatgaaggagaaaaat
atacctcctaatgttgcatcatatcataaaatagttgagataatgacaaaagcttgggaa
gtagatatcgcagaagaacttatgaatgaatttattgagagcaacatgaagcatttgatg
ccagccttccttgacttgatgtacatgtacatggatctggatatgcatgaaaaattagaa
ctaacgttctcaaaatgcatagcaaggtgtcgtccaaacagaatattgtacaccatttat
ctggaatcactagtgaaggttggaaatattgagaaggccgaggaggtatttggtgaaatg
cacagtaatgggatgattggtaccaacacgaaatcatgcaacatcatgctaagaggttat
ctttctgcagaagactaccagaaagctgaaaaagtctatgatatgatgaataaaaagaaa
tacgatgtacatgcagactctttggaaaaactccaagctggtctccttctcggtaagaaa
gttattaaaccaaaagccgtgaacatgaaactggatcaagagcagcgtgaaattttaatc
ggtttgcttctaggaggcactcggatggaatcttatgcacaacgaggggtccatattgtg
cactttcagttccaggaagattctaatgctcattcagttttaagagtgcatattcatgag
cgtttctttgaatggttgccttcagcaagcagatcattcgatgatgggagcaagatacct
tatcagttttcaacaatacctcaccagcatttcagtttctttgcagatcagttctttctg
aaaggtcagcatgtgctcccaaagcttatccataggtggttatctccacgtgttctagca
tattggttcatgtttggaggctccagactcccatcaggtgatattgttcttaagctcagt
ggtgggaacagtgagggtgttgaaagaattgttaactccttacaagcacagtcattaaca
agtaaagtcaagaggaaagggagattcttttggataggttttcagggtagcaatgctgaa
tctttctggagaattatagagcctcatgttttgaacagttttgcgagttcaacgatgcag
gagggtagcagcataggctttagtggtgcccaagataccgacaccaattttgacgatgat
gtgcataataagtaccatacagaaagcgacgagtga
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