Oryza brachyantha (malo sina): 102707055
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Entry
102707055 CDS
T02995
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102707055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102707055
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102707055
Enzymes [BR:
obr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102707055
Peptidases and inhibitors [BR:
obr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102707055
Ubiquitin system [BR:
obr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102707055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
102707055
NCBI-ProteinID:
XP_040383118
LinkDB
All DBs
Position
8:complement(16574818..16579624)
Genome browser
AA seq
990 aa
AA seq
DB search
MDEEKRARTGDTAGSPRKCRRLERPAGETEADSGGGGATLFALMKFSGDRRVRRCQHVSC
GQDDIVLTTILIKTCDDTPKCSAPECDNTDRGGRKITVCLSCESRICDIHGKWHAQNNQH
WIALVYERPNVAYCFACEECYFITDTFWEKMVSEDVVFSDIDEKGEKGMSRMTVDDEADS
YAPMVTVAIVGDGTKVELDVRNPCKQASELVSDGSIQRCPHVLCDQDDIDVVITMIKYCD
VAPICNDYMCGNIEKRNIMVCLGCEKLLCINHAYSHAWSKQNQHWVALVYDKPYALFCFA
CEEFYFISNEEFLRRIEDDKDDFIISTREKGEGMKVDNEVGGHSSGSVIGHAYPIKGIPN
LGNTCYLNALVQCLLVLGRLRARMLGPDAPLTGPGLVLRDLFEDTVSVNNAGDLLDPTKL
LACVRMMNSGFVGTSMQDSHEALCHLRDGLDRDERIKKLSNVQDDAPSAVAPTVIDSIFG
GQISVTRSCQRCSFRSVSCDVFHDLSVPLPLMKSPAKSVGLPLCTKGCRSQRKTHINLLP
AIQKLKSDIAMARKIAERGDSQSPASELEDVVMVKASEPLKADSTKVEQISQSKDTAHGP
LRTQKDKVQGRAVDVIPQKVLYDVKVGVMDATRADLRILEDIILPPSVSSLREEGAPVSS
GDGEKSDSAQSVVSTEANMTTSLAKVTTEDKGKAESRDIVYDRAQDSNSLASMEEFLKLY
FEAEMIEWACENCSKVAEKPGIIPSIKEDASVGDQSEESEKIESHGSDSQLQVILTMDSI
TKVTTPGTISGEQELASDNIRNKNSECHECVQEVVPNWAPSEKQSKLLSGHDQNAITRDE
GRAEQVKLGHSACQVEENQNEQRDKKEGAIQTRLIRKLPPVLTIHLVRSLGPHKVIGHVS
FKEILDVGLFMDPSSEDRDNSSYRLVGVVEHQGSGVDTGHFVAYVRPSHQQHSSGSSSWF
CASDANIREISLEEVLKCEAYLLFYERMEG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagaagagagcgcggacgggggatactgctggctctccacggaaatgccgg
cggctggagcggccagccggggagacagaggccgattctggaggcggcggtgcgacgctg
ttcgcactgatgaaattcagcggcgaccgccgtgttaggcggtgccaacacgtctcgtgt
gggcaggatgacattgttttgaccacaatactgatcaagacttgtgatgacaccccaaag
tgtagtgctcccgagtgtgacaatactgatcgagggggaaggaaaatcacggtgtgcttg
agttgtgagtcccgcatctgcgatatacacggaaaatggcatgcccagaacaaccagcat
tggattgccttggtgtacgagaggccgaatgtggcatattgctttgcgtgtgaagagtgc
tatttcataactgatacattttgggagaaaatggtcagtgaggatgtcgtgttcagcgat
atcgatgagaaaggtgagaaggggatgagtcgaatgacagtcgatgatgaggcagatagt
tatgcacctatggtgacagtggctatcgttggagatggcaccaaggtggagctggatgtg
aggaatccatgcaaacaagcatcagagttagttagtgatgggagtattcagcgatgtcca
catgtcttgtgtgaccaggatgacattgatgtggttataacaatgatcaagtactgtgat
gtggccccgatttgtaatgattacatgtgtggcaatattgagaagaggaatatcatggtg
tgcttgggttgtgagaagcttctctgtataaatcacgcttattctcacgcctggagtaaa
cagaaccagcattgggttgctttggtgtatgacaagccgtatgcgttgttttgcttcgca
tgtgaagagttctatttcatcagcaatgaggagtttttgaggagaatagaggatgacaag
gatgacttcatcatcagtacccgtgaaaagggtgagggaatgaaggttgacaacgaggta
ggcggtcattcatctgggtcagttattgggcatgcctatcctattaaaggaataccgaat
cttggaaacacttgctacttgaatgcattggtgcaatgcctccttgtgcttggaaggcta
cgggcaaggatgttaggaccagatgctcctctaacagggcctggtctagtattgagagat
ctctttgaggacacagtcagtgtgaataatgcaggagacctgctggacccaacgaagctc
ttggcttgtgtacgcatgatgaactcagggtttgtaggcacttctatgcaagacagccat
gaagctctttgccatctgcgcgatggtttggatcgggatgagaggataaagaaactgtct
aacgtacaagacgatgctccgagtgcagtggctcctacagttattgattccatttttggt
ggccagatatctgttaccaggtcatgccaacgttgctcgtttagatcagtttcctgtgat
gtatttcatgatctctcagtgccgctaccactgatgaagtctccagccaaaagtgttgga
ttaccactgtgtactaaaggttgcagatctcaacgcaagactcatattaacctgcttcca
gcaatacagaaactcaaaagcgacattgcaatggctcgtaaaattgctgaaagaggtgat
tctcagagtcctgcttcagaattggaagatgtggtcatggtgaaagcatcagagcctttg
aaagctgattctactaaagtggaacagatctcacaaagcaaggatactgcacatggtcct
ttgcggactcagaaggataaggtccaaggaagggctgttgatgtcattcctcaaaaagtg
ttgtatgatgtcaaagttggggtaatggatgccacaagagcagatttacgcattctagaa
gatattattttacctccatctgtatcttcactaagggaagagggtgcaccagtatcatca
ggcgacggtgagaaaagtgacagtgctcagtcagtagttagtacagaagccaacatgacc
acttccttagcaaaagttactacagaagacaaggggaaagctgagagtagggatattgtt
tatgacagggcacaagattccaactctcttgcgtccatggaggagttcttgaaattgtat
tttgaagcagagatgatagaatgggcctgtgagaattgctccaaggttgctgagaagccc
ggcattataccaagtatcaaggaggacgcatctgttggagaccagagtgaagagtcagag
aagatagaatcacatggttctgattcacagcttcaagttatactcacaatggacagcatt
actaaagtaaccactccagggacgatctctggtgaacaagagttagcctctgacaacata
cgcaacaaaaactctgaatgccacgaatgtgttcaagaagttgtgcctaattgggctcca
tctgagaaacagtccaagctattgagtgggcatgatcaaaatgccatcacacgagatgag
ggcagggcggagcaagtaaagctgggtcatagtgcatgccaagtggaagaaaaccaaaat
gagcagagagataagaaagaaggtgcaattcaaacacgtcttattcgcaagctaccacct
gtattaaccattcatctggtgagatctttggggcctcataaggtgataggacatgtgagc
tttaaggaaatccttgatgtgggactgttcatggaccccagttccgaggacagagataat
tccagctatcgtctagttggtgttgttgagcaccagggcagcggcgttgatacaggacac
tttgttgcttatgtgagaccaagtcatcagcagcacagcagtggctcttcctcatggttt
tgtgcaagcgatgccaacatcagagaaatctccttagaagaagttctcaagtgcgaggct
taccttcttttctacgagaggatggaaggctaa
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