Oryza brachyantha (malo sina): 102707300
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Entry
102707300 CDS
T02995
Name
(RefSeq) RNA-binding protein Y14B isoform X2
KO
K12876
RNA-binding protein 8A
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
obr03015
mRNA surveillance pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102707300
09122 Translation
03013 Nucleocytoplasmic transport
102707300
03015 mRNA surveillance pathway
102707300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102707300
03041 Spliceosome [BR:
obr03041
]
102707300
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102707300
Spliceosome [BR:
obr03041
]
Complex C
Other components
EJC/TREX
102707300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
102707300
NCBI-ProteinID:
XP_015690523
LinkDB
All DBs
Position
3:27853815..27858531
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AA seq
186 aa
AA seq
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MAAAAAAAAAAEDVEFVDYDRDDDDDAMDEDDRGGGRGGRALPVPHIVSRGVMRTRGRLL
GRSPSVLASNRDRFDPLADAGKPGHGPQRSIEGWILLVSGVKEDAEEEDLYNAFSEFGHV
KDLHFNLERRTGYGKGYAFIEYESCEEAEIAIRAMNGSQLLTKTIYVDWAFSRGPIQKLT
STSFPS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcggcggcggcggaggacgtggagttcgtcgactacgac
cgcgacgacgacgacgacgccatggacgaggacgatcggggcggtggccgcggcgggcgc
gcgctcccggtgccccacatcgtctcccgcggcgtgatgcgcacgcgcggccgcctcctg
ggccgcagcccctccgtgctcgcctccaaccgcgaccgcttcgaccccctcgccgatgcc
ggcaaacccgggcacggcccacagcgctctattgaaggatggatactgcttgtctctgga
gttaaagaagatgcagaagaagaagatctgtacaatgctttcagtgaatttggtcatgtc
aaggatctacatttcaatctggaacgccgcactggatatggcaagggatatgcatttatt
gaatatgaaagttgtgaggaagcagaaattgcgatcagagcaatgaatgggtctcagctg
ttaacaaagactatctatgttgattgggcattcagccgaggtcctatacagaagctcaca
agtacaagttttccttcctga
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