Oryza brachyantha (malo sina): 102707368
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Entry
102707368 CDS
T02995
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102707368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obr04040
]
102707368
Ion channels [BR:
obr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102707368
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
102707368
NCBI-ProteinID:
XP_040385173
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Position
12:11185558..11188635
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AA seq
739 aa
AA seq
DB search
MFGACGGGYRTQTIKGRKERFVRLERQPEEEKEQVRAVMDGGGGGGGGGRVQHVMDSYFS
GAPKIRTRSVRMAAAGVMSMSYRSERLMSIGRVFQEDLTNMSQRIFDPQDAFLVRMNRLF
VMACIVSVAVDPLFFYLPAVSATDSNTCIGFDRYLATGATAVRSAIDVFYLARIALQFRT
AYIAPSSRVFGRGELVIDPAAIARRYLRRFFVVDLLSVLPLPQIPIWNFLHRPKGADLLP
TKNALLFIVLVQYIPRLVRFYPITSELKRTTGVFAETAFAGAAYYLLLYMLASHMVGAFW
YLLSIERLDDCWRENCTVLKFHQCKKYMYCGGGNLGQSGFLEWRTMIRQVLAMECAPADE
GGTGFQYGIFTTAIQSGVVSTTNLVAKVLFCLWWGLQNLSSVGQGLKTTHYKGEALFAIF
LALFGLILMALLIGNMQTYLQSMTLRLDEMRLRRRDSEQWMRHRVLPDDLRERVWRHDQY
KWLETRGVDEDSLVRGLPKDLRRDVKRHLCLRLVRRVPLFANMDERLLDAICERLKPSLC
TEATYIVREGDPVDEMLFIIRGRLESSTTDGGRMGFFNRGLLKEGDFCGEELLTWALDPK
AAANLPLSTRTVKAISEVEAFALHADELKFVAGQFRRLHSKQLQQTFRFYSQQWRTWASC
FIQAAWRRHLKRRAAEQRRREEEEEAGASSSCQITTTVLVSRFAKNAMRGARRQRSRRDD
PNLIVLPKPPEPDFQNMEY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgcctgcggcggcgggtacaggacgcagaccatcaaggggaggaaggagagg
ttcgtgcggctcgagcggcagccggaggaggagaaggagcaggtacgggcggtgatggac
ggcggcggcggcggaggcggcggagggagggtgcagcacgtgatggacagctacttctcc
ggcgcgcccaagatccggacgcggtcggtgcggatggcggcggccggcgtgatgagcatg
agctaccggtcggagcggctgatgagcatcgggcgggtgttccaggaggacctgacgaac
atgtcgcagcggatcttcgacccacaggacgcgttcctggtgcggatgaaccgcctcttc
gtgatggcgtgcatcgtctccgtcgccgtcgacccgctcttcttctacctcccggccgtc
tcggccaccgacagcaacacctgtatcggcttcgaccgctacctcgccacgggcgccacc
gcggtgcgctccgccatcgacgtcttctacctggcgcggatcgcgctgcagttccggacg
gcgtacatcgcgccgtcgtcgcgggtgttcgggcgcggcgagctcgtcatcgacccggcc
gccatcgcccgccgctacctccgccgcttctttgtcgtcgacctcctctccgtgctcccg
ctcccgcagatccccatctggaacttcctccaccgccccaagggcgccgacctcctcccc
accaagaacgccctcctcttcatcgtcctcgtccagtacatcccccgcctcgtccgcttc
taccccatcacctccgagctcaagcgcaccaccggcgtcttcgccgagactgccttcgcc
ggcgccgcctactacctcctcctctacatgctcgccagccacatggtgggggcgttctgg
tacctgctgtcgatcgagaggctggacgattgctggagggagaactgcacggtgctcaag
ttccaccagtgcaagaagtacatgtactgcggcggagggaacctggggcagtcggggttc
ctggagtggaggacgatgatccggcaggtgctggcgatggagtgcgcgccggcggacgag
ggcgggacggggttccagtacgggatcttcacgacggcgatccagtccggggtggtgtcg
acgacgaacctggtggcgaaggtgctcttctgcctgtggtgggggctccagaacctgagc
tcggtggggcagggcttgaagacgacgcactacaagggggaggcgctgttcgccatcttc
ctcgcgctcttcggcctcatcctcatggcgctgctcatcggcaacatgcagacgtacctc
cagtcgatgacgctgcggctggacgagatgcggctgcggcgccgggactcggagcagtgg
atgcgccaccgcgtgctccccgacgacctccgggagcgggtgtggcggcacgaccagtac
aagtggctggagacgcgcggcgtcgacgaggacagcctggtgcggggcctccccaaggac
ctccggcgagacgtgaagcgccacctctgcctccgcctcgtccgccgcgtgccgctgttc
gccaacatggacgagcgcctcctcgacgccatctgcgagcggctcaagcccagcctctgc
acggaggccacctacatcgtgagggaaggggaccccgtcgacgagatgctcttcatcatc
cgcggccgcctcgagagctccaccaccgacggcggcaggatggggttcttcaaccggggc
ctcctcaaggagggggacttctgcggcgaggagctcctcacctgggcgctcgaccccaag
gccgccgccaacctgccgctctccacgcgcaccgtcaaggccatctccgaggtggaggcg
ttcgcgctgcacgccgacgagctcaagttcgtcgccggccagttccgccgcctgcacagc
aagcagctgcagcagacgttccggttctactcgcagcagtggcgcacctgggcgtcctgc
ttcatccaggccgcctggaggcgccacctcaagcgcagggccgccgagcagcgccgccgc
gaggaggaagaggaggccggggcgtcgtcctcctgccagatcaccaccaccgtcctcgtc
tcgcgcttcgccaagaacgccatgcgcggcgcgcggcgccagcggtcgcgccgtgacgac
cccaacctcatcgtcctgcccaagccgcccgagcctgacttccaaaacatggagtattga
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