Oryza brachyantha (malo sina): 102707393
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Entry
102707393 CDS
T02995
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102707393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102707393
03036 Chromosome and associated proteins [BR:
obr03036
]
102707393
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
102707393
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
102707393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_VPS8
WDR54
CFAP43_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
102707393
NCBI-ProteinID:
XP_015691685
UniProt:
J3M118
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All DBs
Position
4:17672747..17675726
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AA seq
474 aa
AA seq
DB search
MDAGSRSISSEKNMRYAAPRPPLQEAGSRPYMPSLSTASRNPSAKCYGDRFIPDRSAMDM
DMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRILSFRNKPPEPESILTELRA
DAASLQAKPAKQRRYIPQSAERTLDAPELVDDYYLNLLDWGNSNVLSIALGNSVYLWDAS
IGSTSELVTVDEDDGPITSVSWAPDGRHIAIGLNSSDVQLWDTSSNRLLRTMRGVHDSRV
GSLAWNNNILTTGGMDGKIVNNDVRIRNHVVQTYQGHNQEVCGLKWSGSGQQLASGGNDN
LLHIWDVSMASSMPSAGRTQWLHRLEDHLAAVKALAWCPFQSNLLASGGGGSDRCIKFWN
THTGACLNSIDTGSQVCSLVWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRV
LFMAQSPDGLTVASAAADETLRFWNVFGTPEAPKTATKASHTGMFNSSNHIHIR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggttcgcgctcgatctcatcggagaagaacatgcgatatgcggcgccgcga
ccgccgctccaggaggccggatccagaccgtacatgccgtcgctgagcacggcgtcccgc
aacccgtcagccaagtgctacggtgacagatttattccggacaggtcggcgatggacatg
gacatggcgcactacctgctgacggagccgaggaaggacaaggagaacgccgcggcgtcc
ccggccaaggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccagg
attctctccttccgcaacaagccgccagagcccgagagcatcctcaccgagctccgtgct
gacgcggcttccctccaagccaagccggccaagcagcgccgatacattccccagtccgcc
gagaggactctggatgctccagagctcgttgatgattactacctcaacctgctggactgg
ggaaacagcaatgtgctgtccattgctctgggaaattcggtgtacctctgggatgcctcg
attggttctacgtctgagctcgtcaccgttgatgaggacgatggccctatcaccagtgtt
agctgggctcccgatggccggcatatcgccatcggtctcaactcctctgatgtccagctc
tgggacaccagctcaaaccgactgctaaggacaatgcgaggtgtgcacgattcgagggtc
ggttcactggcatggaacaacaacatcctcacaactggtggaatggacggcaagattgtg
aacaatgatgtgaggattaggaaccatgttgtgcagacataccaggggcacaatcaggag
gtgtgtggcctgaagtggtcaggatcagggcagcagcttgccagtggtggcaacgacaat
ctactgcacatctgggacgtgtccatggcatcctctatgccgtctgccggccgaacccag
tggttacacaggcttgaggatcacttggctgctgtaaaggctctcgcgtggtgcccgttc
cagagcaacctgctggcatctggtggtggtggtagtgaccggtgcatcaagttttggaac
acacataccggcgcatgcctcaactcgatcgacactgggtcacaagtgtgttcgctggtc
tggaacaagaatgagagagagctgctaagctcacatggattcactcagaatcagctcacg
ttgtggaagtacccttcgatggttaagatggctgaactcactggccatacctctcgtgtc
cttttcatggctcagagccctgatggcctcacagtagcatctgctgcagcagacgagacc
ctgagattctggaacgtatttggaacacctgaagcacccaagacagcaaccaaggcttcc
cacactgggatgttcaacagttccaaccatattcatattcgttga
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