Oryza brachyantha (malo sina): 102707470
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Entry
102707470 CDS
T02995
Name
(RefSeq) protein argonaute 1C
KO
K11593
eukaryotic translation initiation factor 2C
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102707470
03036 Chromosome and associated proteins [BR:
obr03036
]
102707470
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102707470
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102707470
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102707470
microRNA pathway
RISC loading complex
102707470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
102707470
NCBI-ProteinID:
XP_006649206
UniProt:
J3LIR0
LinkDB
All DBs
Position
2:complement(27325679..27333467)
Genome browser
AA seq
999 aa
AA seq
DB search
MASRRPTHHQPTDDAPDPPHPAAAAAGGGGRGRGRAGAGRYAQPHQQQGRGRQQQPPRAT
PTTARAASSSATASSGPLAPELRQAMEAPRELAQPSSTHTQAGPSQPPPPADTTPHHIPS
SSKSIRFPLRPGKGSIGTRCMVKANHFFAELPNKDLHQYDVSITPEVTSRFVNRAVIKEL
VNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLVDDDDGSGSERRQRTFRVVIK
FAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPFGRSFFSPDLGRRQPLG
EGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQLLNSDIQSRPLSDAERV
KIKKALRGVKVEVTHRGNMRRKYRISGVTIQATRELTFPVDEGGTVKSVVQYFQETYGFA
IQHTYLPCLTVGNQQRLNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQHPRDRERDI
IKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKYNETGREKDCLPRVGQWNMM
NKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQASGMDFALEPILPPLNARPDQ
VERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQ
VFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSS
PSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKLWQDPQRGTVSGGMIRELLISFK
RSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLEANYQPKVTFIVVQKRHHTR
LFAHNHNDQSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDEN
NFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSAVSGAG
GRGPLSGSSTSRSTRPPGGAAVKPLPALKDNVKRVMFYC
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcggaggccaacgcaccaccagcctaccgatgatgctccagatcctcctcat
cctgccgctgctgctgctggtggtggtggaagagggagaggccgtgccggtgccggtcga
tatgctcagcctcaccagcagcaagggcgaggccgacagcagcaacccccaagggctacc
ccgacgactgcccgtgcggcctcctcatccgccaccgcatcatcaggccctctagctccc
gagctgcgccaagcaatggaagctccccgtgagctcgctcaaccctcatccacgcacacg
caggcaggcccttctcagccaccgcctcctgcggataccacgccgcaccatattccatcc
tcaagcaagtcaattaggttccctttgcgccccgggaagggcagcattggcaccaggtgt
atggtcaaggccaatcatttcttcgctgagctacccaacaaggatcttcatcaatacgat
gtctccatcactccagaagttacatcacgctttgttaaccgagcggtcatcaaggagctg
gtaaatctgtataaggcatcttatctgggcgggaggctgcccgcgtatgatggtaggaag
agcttatacacggctggtccattgccgtttacttcgcaagaatttcagatcactttagtt
gatgacgacgatggttctggttctgagaggcgtcagaggactttccgggtagtaatcaag
tttgctgcacgggccgaccttcaccgtcttgagttgtttttagctgggagacacgcagaa
gctcctcaggaggcactgcaagttcttgatatcgtgctgcgagagctaccatcagcaaga
tatgcgccatttggacgttccttcttttcacctgacttgggcaggaggcaacccctcggt
gagggattagaaagctggcgtgggttttaccagagcattcggcctactcagatgggctta
tcactgaatatcgatatgtcagctacagctttcattgagcctttacctgttattgatttt
gttgcacaactattgaattctgacatccaatcaaggccactttctgatgctgagcgtgtt
aagatcaagaaagccttgagaggagtgaaggtggaagttacccaccgtggcaacatgaga
cgaaagtaccggatatctggtgtgacaattcaggcaactcgtgagctaacttttcctgtt
gacgaaggaggcacagtgaagtcagttgtacaatactttcaagagacatacggctttgcc
atccaacacacctaccttccatgccttacagttggcaaccagcagcggttaaattacctt
cctatggaggtgtgcaaaatagtggaaggacagagatactccaagagattaaatcagaat
cagataagagctcttttggaggagacttgccaacacccacgtgatcgggagcgtgatatt
attaagatggttaaacataatgcttatcaggatgatccttacgcaaaagagtttggcatt
aagataagcgatcgtctggcatcagtagaggcacggattttaccggctccacggcttaag
tacaatgagactggtagagagaaggattgcttaccaagagttggtcaatggaatatgatg
aacaagaaaatggtaaatggtggtaaagtcagaagctggatgtgtgtcaattttgcccgt
aatgtgcaggaaagtgttgttcgtgggttctgccatgaacttgctctgatgtgtcaagcc
tcaggaatggattttgctctggaacctattcttccacctttaaatgcacgtccagatcaa
gtggagcgtgctctgaaagctagatatcatgatgcaatgaatgttcttggaccccagcgc
agggaacttgatttgcttattggaatactacccgacaacaatggctcactttatggtgat
ttgaagcgcgtgtgtgaaatagatcttggaatagtttcacaatgctgttgtacaaagcag
gtgttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggtt
gggggcaggaacactgtgctggtggatgccgtgtcaaggcgtattcctctagtaacggac
agacctacgattatatttggtgctgacgttacccatcctcatcctggagaggacagcagt
ccctcaattgctgctgttgtggcttcccaagattggcctgaggtgacaaagtatgctggg
ttggtttctgcgcaagcacaccgacaagagttgatagaagatttgtataaactctggcag
gatccacagagagggacagttagtggtggcatgatccgtgagctgcttatatccttcaaa
agatcaactggtgagaagccccagcgaatcatattttacagggatggggttagtgaaggc
caattttaccaagttctgctgtatgagttgaatgcaatccgaaaagcatgtgcctcgctg
gaggcaaattaccaaccaaaggtgactttcatcgtggttcagaaacgtcaccacacaaga
ttatttgcacataatcacaatgatcagagttcagttgacaggagtgggaacatactccct
ggtacggttgtagattcaaagatctgtcatccaactgagtttgacttctacctgtgcagc
catgctggtattaagggtactagtcgtcctgctcattatcatgtgttgtgggatgaaaac
aacttcacagctgatgcattacagactcttaccaacaacctttgctacacctatgcaagg
tgcactcgctctgtatcaattgttccacctgcatattatgctcatttggccgcctttcgc
gctcgtttctatatggagccagatacatctgacagcggttctgccgtaagtggggcaggt
ggacgtgggccactttctggctcatcaacgtctcgcagtactcgcccccctggtggtgca
gctgttaagccacttcctgctctgaaggataatgtgaagagagtcatgttctactgctga
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integrated database retrieval system
