Oryza brachyantha (malo sina): 102707645 Help Entry 102707645         CDS       T02995                                  Name (RefSeq) THO complex subunit 2 isoform X2   KO K12879   THO complex subunit 2 Organism obr  Oryza brachyantha (malo sina) Pathway obr03013   Nucleocytoplasmic transport obr03040   Spliceosome Brite KEGG Orthology (KO) [BR:obr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102707645   09122 Translation    03013 Nucleocytoplasmic transport     102707645  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:obr03019]     102707645    03041 Spliceosome [BR:obr03041]     102707645 Messenger RNA biogenesis [BR:obr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      102707645 Spliceosome [BR:obr03041]  Complex C   Other components    EJC/TREX     102707645  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     102707645 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 RNase_Zc3h12a_2 ABPF_N Motif Other DBs NCBI-GeneID:  102707645 NCBI-ProteinID:  XP_006646608 LinkDB All DBs Position 1:complement(30840617..30857123) Genome browser AA seq 1748 aa AA seqDB search MSPPLQAPDYKHVTEECLREWKSQSAAAAFRVPDPVPMARFLYELCWAVVRGDLPPQKCR VALDSVEFVEEARREEVGSVLADIIAHLGQDVTISGEYRNRLVKMTKSFVESSLIVPRLL QERCEEEFLWEVEQSKSKGQDLKAKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQI GSDLACQNSSSVTISIIKSLIGHFDLDPNRVFDIVLDCFELYPDSTIFYQLIPLFPKSHA AQILGFKFQYYQRLDVNSTVPPGLFRIAALLVKSGFIDLDSLYAHLLPNDDEAFEHFESF VMRRIDEASKIGKINLAATGKDLMDDEKQEITIDLYTALEMENDIVEERAPEIEKNQKLG LLLGFLSVHDWDHAQILFDRLARLNPIEHVEICDGLFRIIESSISSAYDIIFQTYYKMHR NTGAHMMETSPSSSQSSVVDLPKEFFQMLSACGPYLHRDTQLFQKVCRVLKAYYLSSKEP NRTAGVVSPDSRIEEALGSCLLPSLQLIPANPAVDMEIWGVLSLLPYEARYRLYGEWEKD TEQNPIVLAARQTAKLDTRRLLKRLAKENLKQLGRMVAKLAHANPMTVLRTIIQQVEAYR DMITPVVDAFKYLTQLEFDILQYIVIERLAQGGREKLKDDGLNLSDWLQCLASFWGHLCK KHHSVELRSLFQYLVNQLKKDSGIELVVLEELIQQMANVHYTENMTEEQVDAMAGSETLR LQASLFGSTRNSKVLSKSTNKLRDSLLPKEEPKLAIPLLLLIAQHRSKIIINADATYIKM VSEQFDRCHGILLQYVEFLSTAINPTTYVQLIPPMEDLINKYHIEPDVAFLIYRPVMRLF KSTNGGDTCWPLDDNEEGESVSCDDLILQLEMSHKPIMWSDLLSTIRKTLPTKAWNGLSP DLYATFWGLTLYDLHFPKDRYDAEIKKLHENLKQLEDNSDNSSIAISRRKKDKERIQDLL DKLNNESQKHQQHIASVLQRLDREKVKWLSSSPDALKINMEFLQRCIFPRCVFSMQDAVY CALFVQTLHSLETPCFNTVNHIDVFICKTLQPMICSCTEYEAGRLGRFLHETLKMAYHWK SDESLYERECGNKPGFAVYIRFPNSQRVSYGQFVRVHWKWSGRITKVLNQCMESKEYMEI RNALIVLTKISSIFPVIRKSGVNLEKRVAKLKGDEREDLKVLATGVAAALAARKSSWLSE EEFGMGLLELKQGPAKVLPGNQSTDPLTAKDQSVRAKSIEGRHERSEGAMKSDAQQKKNV LSSNGSENQISSSSAQGKASGVIRGSDEPPKLLSDEGVKVSKPSAESETRVSQKRVSHNA GKTSKHDLIKEDTKSGKSTSRGVTQQASSVPVDKEVSSQTADGVHDTTANSLAASNGNLH MAPRKQKRFVPAEEQDRGTKRRKGESESRDGDFSEHADKDKNLDSRLVDKFRPMDHEKST SEEQIISRPEKLKEKVDDKYDRDPREKADRTERRRGEDTIERPTDKSLERRERSIERVQE RGTDRAPDKGREDRNKEERSKAKHAEPSIDRAHPSDERAERFRGQSLPPPPPLPASFVPQ SVGANRRDEDTDRRGGSTRHSQRSSPRRDDKEKWHLEENTTSLQDDGKHRREEDIRDRKR EDRDVSSSKVDDRDRDKGSIVKEESDPNSASKRRKIKRDQSGLEAGEYAPSAPQLPSHGT SSSQLFETRERDRKGAISQHRASHPDDLPRMHGKDSNKSSRREADQVHEREWEEEKRPRA ETKRKHRK NT seq 5247 nt NT seq  +upstreamnt  +downstreamnt atgtcgccccctctgcaggcgcccgactacaagcacgtcacggaggagtgcctccgcgaa tggaagagccagtcggccgccgccgccttccgcgtccccgatccggtccccatggcgcgc ttcctctacgagctctgctgggcggtggtgcggggggacctgccgccgcagaagtgcagg gtggctctggactcggtggagtttgtggaggaggcacggcgagaggaggtcggctcggtt ctcgccgacatcatcgcccacctagggcaggatgttacaatctctggtgaataccgcaac cgtcttgtcaaaatgactaaatcatttgtggagtcatcgttgattgtgcctaggcttctt caagaaagatgcgaagaagaattcctctgggaggttgaacagagtaagtcaaaggggcaa gatttgaaagccaaggaggtcagggtcaacacacggctcctttatcagcaaaccaaattc aaccttctaagagaggaaagtgagggctatgccaagttggtaaccctcctttgtcaaatt ggttcagatttggcttgtcaaaattcttcttcagttactatcagcattataaagtcattg attgggcattttgacctggatccaaatcgtgtatttgatatcgttctggattgttttgaa ctatatccagacagcaccatcttttaccagcttatacctcttttcccaaagtcccatgct gctcaaatattgggcttcaagttccaatattaccaacggttggatgtcaacagcactgtt ccacctgggcttttccggatagcagctttgttggtcaaatcaggtttcattgaccttgat agcctctatgctcatttacttccaaatgatgatgaggcatttgagcattttgaatccttt gtcatgaggagaattgatgaggctagtaaaattggcaaaataaatcttgctgccacggga aaggaccttatggacgacgagaagcaagaaattactattgatttgtacacggcattggag atggaaaatgatatagttgaggagcgagcccctgagattgaaaagaaccagaaacttgga cttcttcttggtttcctgtcagttcatgattgggatcatgcacagatcctctttgaccgt cttgcacgcctaaatcctattgagcatgttgaaatctgtgacggtttatttagaattatc gaaagcagtatttcttcagcgtatgatataattttccaaacatattataagatgcatcgt aacactggtgctcatatgatggaaacatcaccttcctcttcacaaagttctgtggttgat ctgccaaaagagttcttccaaatgctttctgcttgtggaccataccttcatcgtgacaca caattatttcagaaggtttgcagagtacttaaagcatactacctctcatcaaaagagcca aaccgcacagcaggtgtagtgtctccggactctcggattgaagaagcacttggatcatgc ttgcttccatcattgcagcttatacctgcaaaccctgctgttgatatggagatttgggga gttctttctcttcttccttatgaggcccgttatcgcttgtacggtgaatgggagaaggat actgaacaaaacccaattgtccttgctgcaaggcaaaccgcaaagttggataccagaagg ctcttaaagcggcttgctaaggaaaatcttaagcagcttggccgcatggtggctaaactt gcccatgcaaatccaatgactgtactgcggacgattatccagcaggttgaagcatatagg gacatgattactccagttgtggatgcttttaaatacttgactcagctggagtttgacatc ttgcaatatattgtaattgaacgcttggctcaaggtggccgtgagaaacttaaagatgat ggtcttaatctgtcagattggcttcagtgtcttgcatcattttgggggcacctgtgcaaa aagcatcattcggtggaactgagaagccttttccagtaccttgttaatcaactgaagaaa gactcaggcattgaacttgttgtactggaggaactcattcagcaaatggcaaatgtgcac tacactgagaacatgactgaggaacaggtcgatgctatggctggaagtgaaacattgcgg cttcaagcttcactatttggatcaacaagaaattctaaggttttgagtaagtctacaaat aagttgagggattctctgcttccaaaagaagaacctaaacttgcgattcccctattactg cttattgctcagcatcgatccaagattataattaatgctgatgccacatatatcaaaatg gtcagtgagcaatttgaccggtgccatggaatattacttcagtatgttgagtttctttca actgctataaatccaacaacttatgttcaactaatacctccgatggaagatctgatcaat aaatatcatatcgagcctgatgttgcttttcttatatatcgacctgtgatgaggcttttc aaaagcactaatggtggcgacacctgttggccactggatgacaatgaagaaggggagtct gtatcatgtgatgatctgatattgcagcttgaaatgtctcacaagccaataatgtggtca gatcttcttagcacaatccggaaaactttgccaacaaaagcctggaatggtttatcacct gatttgtatgctactttctgggggttaacactttatgaccttcatttccccaaagatcgc tatgatgcagaaataaagaaattgcatgaaaatcttaaacaactggaagataactcagat aactctagtattgcaatctcgcgacgcaagaaagacaaggagagaatccaagatttgctt gacaaattgaacaatgaatctcagaagcaccagcaacacattgcatcagtgctccaaagg ctagatcgtgaaaaggttaagtggttgagttccagtccagatgctctgaagatcaacatg gaatttctccagcgttgcatattccctcgctgtgtttttagcatgcaggatgctgtgtat tgtgctctgtttgtccaaacactgcactcacttgaaactccatgtttcaacacggtgaat catatagatgttttcatctgcaagactctacagccaatgatctgtagctgcacagagtat gaggccggaaggcttggaaggtttcttcatgaaacactgaagatggcctaccattggaag agcgatgaatctttgtatgagcgtgaatgtggaaataagccaggtttcgctgtgtacatc agatttccaaacagccaacgcgtatcgtatggccagtttgttcgagttcattggaagtgg agtggaagaataactaaggtgctgaaccagtgcatggaatcaaaagaatacatggaaatc agaaatgcccttattgtgctcacgaagatatctagcatttttcctgtgattcgtaaaagt ggagtaaatcttgagaagcgtgttgcgaagctcaagggggatgaaagggaagatctgaaa gttctggcgactggtgtagctgctgctttggcagctcgtaagagttcatggctatctgaa gaagaatttggcatgggtctccttgaactgaagcaagggccagcaaaagttttacctgga aatcaatcaacagatcctttgacagcaaaagatcagagtgtccgtgcgaaatccatagag ggtaggcatgaaagatcagaaggtgccatgaagtctgatgctcaacaaaagaaaaatgtc ttatcgtccaatggatctgaaaaccaaatatcatcttcctctgcacaaggaaaagcttca ggggttatacgaggctctgatgaacctcccaaacttctttctgatgagggagttaaggtt tcaaagccttctgcagaatctgagacaagggtgtcacaaaagcgtgtgtcacacaatgct gggaagacatctaagcatgatttgataaaggaagatacaaaatctgggaaatctacaagc agaggtgttactcagcaagcctcttcagttcctgttgataaagaagtatcatctcagaca gctgatggtgtgcatgataccactgctaattcattggctgctagcaacggtaacttacat atggcgccacggaagcaaaagagatttgttcctgctgaagaacaagatagaggaactaaa cggaggaaaggggagagtgaaagccgggatggtgacttctcagaacacgcagataaggac aaaaatttggactcaaggttggtagataagtttcgtcccatggatcatgagaaaagtact agtgaggaacaaatcataagtaggccagagaaattaaaagaaaaggttgatgacaaatat gatagggatcctagagaaaaagcagatcgaactgagaggcgtcggggagaagacacgatt gagagaccaacagataaatcattggagaggagagagcgttctattgaaagagtgcaagaa cgtgggacagatagagctcctgataaaggaagagaagacaggaataaggaggagagaagt aaagctaagcatgctgaaccctccatagatcgtgcacatccttctgatgaacgggcagaa cggttccgaggacaaagcttgccaccacctccaccccttccagcaagttttgtaccccaa tcagttggtgctaacaggagagatgaagatactgaccgaaggggtggtagcactaggcat agccaacgatcatctcctaggcgtgatgataaagaaaagtggcacttggaggagaacact acgtcattgcaggatgatggaaaacaccggagagaggaagatattcgggacagaaagcgt gaagacagggatgtttcatcaagcaaggtagacgaccgggatagggacaaaggtagcatt gtgaaggaagaaagtgatccaaatagtgcttccaaacggcggaagattaagagagatcag tctggtttagaagctggtgaatacgcaccttctgctccacagcttcccagccatggaacc agtagctcgcagttatttgaaacacgagagcgggaccgaaagggagcaatttcacagcat cgggcgtcacatcctgatgaccttcctagaatgcatggaaaggactcaaacaagtcaagt cgtagagaggctgaccaagttcatgagagagaatgggaagaggaaaagcggccaagagct gaaactaaaagaaagcaccggaagtag

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