Oryza brachyantha (malo sina): 102707752
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Entry
102707752 CDS
T02995
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102707752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102707752
03009 Ribosome biogenesis [BR:
obr03009
]
102707752
04131 Membrane trafficking [BR:
obr04131
]
102707752
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102707752
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102707752
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102707752
Membrane trafficking [BR:
obr04131
]
SNARE
SNARE associated proteins
Others
102707752
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102707752
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102707752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
nSTAND_NTPase5
Parvo_NS1
ATPase_2
AAA_18
ABC_tran
Viral_helicase1
Vps4_C
NB-ARC
AAA_7
NACHT
AAA_lid_PRS2_C
TsaE
IstB_IS21
DUF815
ResIII
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
102707752
NCBI-ProteinID:
XP_006649413
UniProt:
J3LK32
LinkDB
All DBs
Position
3:complement(2409166..2413329)
Genome browser
AA seq
809 aa
AA seq
DB search
MASPGEPSSSSDPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVIGMHSDTMEKLQLFR
GDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKR
VHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEY
CIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAAL
CTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNV
SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRL
QIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRK
DNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF
ADQPASGAGAAADPFASAAAAADDDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccccggagagccctcctcctcctccgatccgaaggggaagaaggattattcg
acggcgatcctcgagcggaagaagtcgccgaacaggctggtggtcgacgaggccaccaac
gatgataactccgtcatcgggatgcactccgacaccatggagaagctccagcttttccgc
ggcgacactgtgctactcaagggtaagaagagaaaagacactatctgcattgtgcttgcg
gatgacacatgtgaggagccgaagatcagaatgaacaaggttgtcaggaagaacctgagg
gtgcgacttggtgatgttgtttctgttcatcaatgcccagatgtcaaatacggcaaacgg
gtgcacatacttccaattgatgatacggttgagggcatcactggaaatttgtttgatgcc
ttcctgaaaccatacttccttgaagcatatcgtcctttgaggaaaggagaccttttcctt
gttaggggtggaatgagaagtgttgaattcaaagttatagagactgaccctgcagagtac
tgcattgttgcacctgatacagagatattctgtgatggtgagcctattaagagggaggat
gaggaaaggcttgatgaagttggttacgatgatgttggtggagtcagaaagcagatggcc
caaatcagagaacttgttgagctcccattgcgccatccccaactgttcaagtctattggt
gtgaagcctccaaagggcatactgctgtatggaccccctggctctggcaagaccctcatt
gctagagctgtagctaatgaaacaggtgctttcttctttttgattaatggccccgagatt
atgtccaagctggcaggagaaagtgagagcaatctcaggaaggcatttgaagaagctgag
aagaatgcgccatcaatcattttcattgatgagattgattccatagccccaaagagagaa
aagacccatggagaagttgagaggcgtattgtttcacagctgttgactcttatggatggt
ctcaaagctcgttcccatgtcattgtcatgggtgctacaaacaggccaaacagtattgat
cctgctctcaggaggtttggtaggttcgaccgggagattgacattggtgttcctgatgaa
gttgggcggcttgaggttcttcggattcacactaaaaacatgaagctggctgaagatgtt
gacctggaactcattgccaaagacactcatgggtatgtgggtgctgatcttgctgctctt
tgcactgaggctgctctccaatgcatccgtgagaagatggatattatagatctcgaggat
gagaccatagatgctgagatactgaactcaatggctgttacaaatgaccacttcaagact
gcactagggacaagcaacccatctgctctccgtgaaactgtcgttgaagttccaaatgtc
tcttgggaagacattggtggactggagaatgttaaacgggagctgcaggagactgtccaa
tatccagttgagcatccagagaaatttgagaagtttggcatgtctccgtccaaaggtgtt
ctgttctatggacctcctggctgtggtaagactttgttggccaaggcaattgctaacgag
tgccaagctaacttcattagcgtcaagggacctgagctgcttaccatgtggtttggtgag
agtgaggccaatgtgcgtgagatctttgacaaggctaggcagtcagctccttgtgtcctc
ttctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgctggt
ggtgctgctgatagagtgctgaaccagctgttgactgagatggatggcatgaacgcaaag
aaaactgttttcattattggtgctactaacaggccagatatcattgaccctgccttgctc
aggccagggcgtcttgatcagctgatctacattcctcttcctgatgagcaatctaggctg
cagatcttcaaagcctgcctcaggaagtcacctgtggccaaggatgttgacctgaatgcc
cttgccaaatacacccaggggttcagtggtgcagatattacagaaatctgccagcgtgcg
tgcaaatatgccatcagagagaacattgaaaaggacatcgagagggagaggcggaggaag
gacaaccctgaagccatggaggaggacgaggttgatgacattgctgagatcaaggcagct
cacttcgaggagtcgatgaagtatgctcgccggagtgtgagcgatgccgacatccgcaag
taccaagccttcgcccagactctccagcagtctcgtgggtttggtaccgagtttaggttc
gctgaccagccagcgtccggcgcaggcgctgctgccgacccattcgcatccgctgctgct
gcagctgacgatgatgatctatatagttag
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