Oryza brachyantha (malo sina): 102707913
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Entry
102707913 CDS
T02995
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X2
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102707913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102707913
03036 Chromosome and associated proteins [BR:
obr03036
]
102707913
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102707913
Coactivators
SAGA/TFTC/STAGA complex
102707913
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102707913
STAGA complex
102707913
TFTC complex
102707913
SAGA complex
102707913
SLIK complex
102707913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
RovC_DNA-bd
Motif
Other DBs
NCBI-GeneID:
102707913
NCBI-ProteinID:
XP_006645003
LinkDB
All DBs
Position
1:complement(27872360..27877645)
Genome browser
AA seq
539 aa
AA seq
DB search
MADPPSAAATASPQPDQLAAAAASTPQNPNPNPLLSPQIPPSPNVSDLSSPQLDPAATGA
GAMDYPPRPPQMQAASPGQAAAGPGGFSQIHRSGSASRLAAVGQLPQYAAAAARMYGSQM
NFSGGGGQVGQQQQQQQQLAARAAMLSQGQLGILQAQGNAASAAHYGLQSQMMAQPRQKG
IVQGAQFGTPNGAQVLHGMQSMGVNLGMNQIRPNGTIPYNAQQRFAHAQAQIRPQQTSQQ
GTLSPQVAGQGLTRTASIAALNSQLPGSSTNGPMVQMSQKQHQAAWLKQMQSLPSPVSPQ
QFHNQQRLLLIHQLQQSGLSQQQIAQTQQQHPHLNTQMLQQQHILQQLQQQQSPRISASG
SQKSMNLTGSQPGTPMSGGTMTGGSASQGAEGTNQLLGKRKIQDLVTQVDPLGKVDPEVE
DLLLEIADDFIDSVTAFACTLAKHRKSSVLEAKDVLLHLEKNWNLSVPGYLREDKNPQRH
SVKATTVDPPQPECESAGIRSTGNKLIINNSVGNHQTRAPVTEPSPMSTMGPLSKVPRF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgccgtccgcggccgccaccgcctcgccgcagcccgatcagctcgccgcc
gccgccgcctccaccccgcaaaaccccaaccctaaccccctcctctctccccaaatcccc
ccgtcgcccaacgtctccgacctctcgtccccgcagctcgacccggccgccaccggagcc
ggggccatggattaccccccgcgtccgccgcagatgcaggctgcttcgcccggtcaggcg
gcggccgggcccggaggcttcagtcagatccaccgctccggctcggcctcccgcctggct
gctgtcggccagcttccacagtacgctgcggcggccgccaggatgtacggcagtcagatg
aacttctcgggtggtggaggacaggtggggcagcagcagcagcagcaacagcagctggca
gctcgcgcggccatgcttagccagggccagctggggattctgcaagcgcaggggaacgca
gcatctgcggcgcactatggactccagtcacagatgatggcgcagccaaggcaaaagggc
atagtgcaaggtgcacaatttggtactcccaatggggctcaagtgttacatggtatgcag
tccatgggagtcaatttgggtatgaatcagatcagaccaaatggaactattccgtataat
gctcaacaacgttttgctcatgcacaagcacaaataaggccacagcaaacatcacagcaa
ggcacactatctccacaggttgcgggtcaaggcttgacaagaacagcctcaattgctgca
ttaaattcacaattacctgggtcatcgacaaacgggccaatggtgcaaatgtctcagaaa
cagcatcaggcagcatggctaaaacaaatgcaatcattgccatcacctgtttctccccaa
caatttcacaatcagcaaaggttgctattaatacatcaacttcagcagtcaggattgagt
caacaacagatcgcacaaactcaacagcagcatccgcatctcaatacccagatgttacag
cagcagcacattttacaacaacttcagcaacaacaatctccaaggatatcagcatctggt
tcccagaagtccatgaacctgacaggatcacagccaggcactcctatgtcaggtggaact
atgactggaggaagtgcaagtcaaggagcagaaggaaccaaccaacttcttgggaagaga
aaaatacaagacttggttacacaggtagatcccctgggaaaggttgatccagaagtggaa
gacttgcttttggagattgctgatgacttcattgattcggtgactgcatttgcatgtacc
cttgcaaagcatcggaaatcatcagtcctggaagccaaggatgtattgctgcacctagag
aaaaattggaatttatctgttcctggttacttgagggaggataagaatccgcaaagacat
tctgtgaaggccacaacagttgaccctccgcaaccagaatgtgaatcagctggtattaga
agcacaggcaataaactgataattaacaattcagttggcaaccatcaaacaagagcccca
gtcactgagccttcaccaatgtccacaatggggcctctgtcaaaagtgccccgtttctaa
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integrated database retrieval system
