Oryza brachyantha (malo sina): 102708193
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Entry
102708193 CDS
T02995
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Module
obr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102708193
Enzymes [BR:
obr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102708193
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Glug
Motif
Other DBs
NCBI-GeneID:
102708193
NCBI-ProteinID:
XP_040384732
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Position
11:complement(5320883..5326377)
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AA seq
395 aa
AA seq
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MRIMTQYQISLAQLTKTLVVALATAAAAATEYSVVDYGARAGGRVDAAGAFLAAWAAACG
DDGYRPVMRVPAGTFLVGQAYFLGPCRSAGGVVLAIDGTVVAPPAVANTSWIMFHYAHGL
AIRGGTLDGNGRSFWACKAAAGRDCPPGTTTLDISQSNNVSVKRVTLVDSKNVHVSIFDC
AGVTLQGLRITAPADSPNTDGIHVALSRDVSILSATVGTGDDCVSMGPGTSGVVLRSIRC
GPGHGISIGSLGGGAGEGEVRNVTVESAVLTGTQNGLRIKTWGKPNAGRVAGVRFTRVAM
RGVGNPIVVDQNYCPGNVNCPGQSSGVKISDVEYDDITGTSATEVAVKFDCSGSNPCTGI
RLKNINLTYDGKPAQSFCKNAGGSASGAVSPPSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatgacccaatatcaaattagcctagcccaattaaccaaaaccctagtcgta
gcgctcgcgacggcggcggcggcggcgacggagtacagcgtggtggactacggggcgcgg
gcgggcggcagggtggacgcggcgggggcgttcctcgccgcgtgggcggcggcgtgcgga
gacgacgggtaccggccggtgatgcgcgtccccgcggggacgttcctggtcgggcaggcg
tacttccttggcccctgccgcagcgccggtggcgtggtgctcgccatcgacggcaccgtc
gtcgcgccgccggccgtcgccaacacgtcgtggatcatgttccactacgcccacggcctc
gccatccgcggcggcacgctcgatggcaacggccgctccttctgggcctgcaaggccgcc
gctggccgcgactgcccgcccggcaccaccacgctggacatcagccagtcgaacaacgtg
tccgtgaaacgggtgacgctggtggacagcaagaacgtccacgtgtccatcttcgactgc
gccggcgtgacgctccagggcctcaggatcaccgcgccggcggacagccccaacaccgac
ggcatccacgtggcgctctcccgcgacgtctccatcctcagcgcgacggtcggcaccggc
gacgactgcgtctccatggggccgggcacctccggcgtggtcctccgcagcatccggtgc
ggcccgggacacgggatcagcatcggcagcctcggcgggggcgccggcgagggggaggtc
cgcaacgtgacggtggagtccgcggtgctcaccggcacgcagaacggcctccggatcaag
acgtgggggaagcccaacgccggccgcgtcgccggcgttaggttcacccgcgtcgccatg
cgcggggtcgggaaccccatcgtcgtcgaccagaactactgccccggcaacgtcaactgc
cccggccagagctccggcgtgaagatcagcgacgtggagtacgacgacatcacggggacg
tcggcgacggaggtggcggtgaagttcgactgcagcggcagcaacccgtgcacggggatc
aggctcaagaacatcaacctgacgtacgacggcaagccggcgcagtcgttctgcaagaac
gccggcgggtcggcgtccggcgccgtcagcccgccgagctgcctctga
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