Oryza brachyantha (malo sina): 102708245
Help
Entry
102708245 CDS
T02995
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
obr03015
mRNA surveillance pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102708245
09122 Translation
03013 Nucleocytoplasmic transport
102708245
03015 mRNA surveillance pathway
102708245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102708245
03041 Spliceosome [BR:
obr03041
]
102708245
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102708245
Spliceosome [BR:
obr03041
]
Complex C
Other components
EJC/TREX
102708245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
102708245
NCBI-ProteinID:
XP_040380125
LinkDB
All DBs
Position
5:1815948..1819305
Genome browser
AA seq
199 aa
AA seq
DB search
MAAVTNADVEAVDFDPDDDDLMDEDASDPTPAPAPPRLRSTIAGGDDGGGARRTKGRGFR
DEPSSRLAGAGRSADFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQV
KNLHLNLDRRTGFVKGYALIEYEAFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRN
VRKRSPRAHRSRSPPRRRY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgaccaacgccgacgtggaggcggtcgacttcgaccccgacgacgacgac
ctcatggacgaggacgcctccgaccccacgccggcgcccgccccgccgcgcctccgctcc
accatcgccgggggcgacgacggcgggggcgcccggaggaccaagggccgcggcttccgc
gacgaacccagctcccgcttggcaggcgccggacgctccgccgacttcgactccctcggc
tccgacggcggccccggccccgtccgatccattgaagggtggattgtgctagtcactgga
gttcatgaagaagctcaggaagatgaccttcacaatatttttcgggactttggacaggtc
aaaaacttgcatttgaatttggatcgccgaactggattcgtcaagggatatgccttgatt
gagtatgaagctttcgaggaagctcaagctgcaataaaagcattggatggaacagagctt
ctaacacaaattataagtgttgattgggcatttagtaatggcccagtcaagcgtagaaat
gttcggaagagatcaccaagagctcatcgctctagaagcccaccaaggagaagatactga
DBGET
integrated database retrieval system