KEGG   Oryza brachyantha (malo sina): 102708245
Entry
102708245         CDS       T02995                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03013  Nucleocytoplasmic transport
obr03015  mRNA surveillance pathway
obr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102708245
  09122 Translation
   03013 Nucleocytoplasmic transport
    102708245
   03015 mRNA surveillance pathway
    102708245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102708245
   03041 Spliceosome [BR:obr03041]
    102708245
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102708245
Spliceosome [BR:obr03041]
 Complex C
  Other components
   EJC/TREX
    102708245
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 102708245
NCBI-ProteinID: XP_040380125
LinkDB
Position
5:1815948..1819305
AA seq 199 aa
MAAVTNADVEAVDFDPDDDDLMDEDASDPTPAPAPPRLRSTIAGGDDGGGARRTKGRGFR
DEPSSRLAGAGRSADFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQV
KNLHLNLDRRTGFVKGYALIEYEAFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRN
VRKRSPRAHRSRSPPRRRY
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcggcggtgaccaacgccgacgtggaggcggtcgacttcgaccccgacgacgacgac
ctcatggacgaggacgcctccgaccccacgccggcgcccgccccgccgcgcctccgctcc
accatcgccgggggcgacgacggcgggggcgcccggaggaccaagggccgcggcttccgc
gacgaacccagctcccgcttggcaggcgccggacgctccgccgacttcgactccctcggc
tccgacggcggccccggccccgtccgatccattgaagggtggattgtgctagtcactgga
gttcatgaagaagctcaggaagatgaccttcacaatatttttcgggactttggacaggtc
aaaaacttgcatttgaatttggatcgccgaactggattcgtcaagggatatgccttgatt
gagtatgaagctttcgaggaagctcaagctgcaataaaagcattggatggaacagagctt
ctaacacaaattataagtgttgattgggcatttagtaatggcccagtcaagcgtagaaat
gttcggaagagatcaccaagagctcatcgctctagaagcccaccaaggagaagatactga

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