Oryza brachyantha (malo sina): 102708498
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Entry
102708498 CDS
T02995
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DRS1-like
KO
K03257
translation initiation factor 4A
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102708498
03012 Translation factors [BR:
obr03012
]
102708498
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102708498
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102708498
mRNA cycle factors
Stress granule specific factors
102708498
Translation factors [BR:
obr03012
]
Eukaryotic type
Initiation factors
eIF-4
102708498
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102708498
Exosomal proteins of bladder cancer cells
102708498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102708498
NCBI-ProteinID:
XP_040376703
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All DBs
Position
2:5116378..5120618
Genome browser
AA seq
945 aa
AA seq
DB search
MDSSKVCMAQQEQNMVSGRVEKQISAQAMRSKSSEKKAVQGQAFTGLFNKRNCFACNEAS
HTLDQCSIKERLATGAQLFAHSTRQPFYMIQPSEEVVEKEKFYHHCLLITSDVSNLDPRK
VKVEVSKSWQLTNWEIRTEGRQNFLVSFNSEDDLISCLQTPRIETSINDKEVNFTVARWK
EDDEENIELIRAWFLVYRVPRIYRNWKELYQIASAVGVLIDVDEDSLEGDNKEPIKLKIA
LRSADGAPFSCHFVFGWYSRSVTFTMEDKVQNIVCEREVLQDSNGEDHLDVFDKECKDNI
NEVIEIPPEILNKGVDLKSNNHDTIIVASTHNHTLDVKGCSGKELGTTEPAVSVEEPNFV
EELRAQTEITSKDNNTSAPVCTTSNSGKTVEGSRSAEREQSISRRSTSMTGDTCFKATTV
IHSKKITEGSSKVEGVQSTSGNSIGMIQETPFRGIQKPTVKIVYARRNKMQKRSMENQDS
KSLREKEHLNELETALGGQGQKSDNESGGDGNNAIAPSAIAINSKKKQTXKDSATIQGAQ
SISGSSIGETPTKGPRGAQLDAKQHVSKMSKHAHNEFFESFSEMGLQENLLEGIYAYGLD
RPSVVHQRGIVPLCEGLDSIRQALSGTTVTLCCGILQRLDYASKECQALVLVPTCDLAQE
TKKVIGALGHCLGVKADAFYGGINVCEDQRILSSGVQVVVGTPCHVLGMLKGRALCPDHI
RMLILDEADDIFRCCKDQVDSWLLPTKTQFGFFSATMSHEALEMCRKFMNKPVEIIVPRD
EELEGINVKQFYVNIEKEDYKLDKLCDLLDPAAITRSIVVNTRRQAKSLTKSIRAKGYTV
SAAHGGMNQGARDQAVQDFQSGSSSILIATDPRGIDVLHAPVVIIYDLPTQQVSYLRHVQ
RSRQHGRKGAAISFITHADEHNFSSIRKFVNTQIEELPSNVSDFF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagcaaagtgtgcatggcacaacaagagcagaacatggtttcaggaagggtt
gaaaaacagatttctgcacaagccatgagaagtaagagtagcgaaaagaaggctgtgcaa
gggcaagcatttactggtttattcaataaaagaaactgctttgcatgtaacgaggcatca
cacactctggatcaatgtagcataaaagaaagactggctactggtgcacaattatttgcc
cattctacaaggcaaccattctacatgattcaaccttcggaggaagttgttgagaaggag
aaattctatcatcactgcctgctaatcacatctgatgtcagtaacttagacccaagaaaa
gtgaaagttgaagtaagcaagtcctggcagctgactaactgggagataaggacagaaggt
agacagaatttcctagtatccttcaactcagaggatgacctaataagctgtttacagact
cccagaatagaaacgtctataaatgataaggaggtgaactttactgtagcaaggtggaag
gaagacgatgaagaaaacattgaattgattagagcatggtttttggtttatagggtccca
aggatatacagaaactggaaggagctatatcagattgcatcagcagtcggagtattgatt
gatgtggatgaggacagtttggaaggtgacaataaggagcctattaagctaaagattgca
ttacgaagtgctgatggtgctcctttctcatgccattttgtgtttggatggtattcaaga
tcggttacattcacgatggaagacaaagtacaaaatatagtgtgtgaaagggaggtctta
caagatagcaatggtgaagatcatcttgatgtatttgataaggaatgcaaagacaacata
aacgaagttattgaaattcctccagaaatactgaataaaggggtggatttgaagagcaat
aaccatgatactataattgttgcttcaacacacaaccatacattggacgttaaaggctgc
tcaggcaaggaactggggacaacagaaccagctgtatcagtggaagagcctaactttgtt
gaggagttaagagctcaaacagagatcacaagcaaagacaacaacacaagtgctccagtg
tgcactacaagcaactctggaaaaacagtagaaggcagtcgtagcgctgaaagggagcaa
tccattagcagaaggtcaactagcatgactggagacacatgcttcaaagcaaccactgtg
atccactctaagaaaataactgaaggcagttcaaaagttgaaggggtgcaatccacaagt
ggaaattcaataggcatgattcaagaaacaccattcagaggtatacaaaaaccaactgtc
aagattgtgtatgcacgaagaaataaaatgcaaaaaagatccatggagaatcaggattcc
aaaagcctccgagaaaaagaacatctaaatgaactggaaacagccctagggggtcaaggg
cagaaatcagataatgagtctggaggagatggaaacaatgcaattgctccatctgccatt
gcaatcaactctaagaagaaacaaacantaaaagactctgcgacaattcaaggagctcaa
tctatcagtggtagttcgattggagaaaccccaacaaaaggacccagaggagctcaactt
gatgcaaagcaacatgtttccaaaatgagcaaacacgcacacaatgaattttttgagagt
ttcagtgagatgggtctccaagaaaacctactggagggaatatatgcatatggtctggat
aggccttctgtagtccatcaaagaggaattgtcccactatgcgagggtcttgatagtatc
cggcaggcactgtctggcacaactgtgacattgtgttgtggcattctgcaacgactagat
tatgcatctaaagaatgccaggctttggttcttgtaccaacatgtgacttagcacaagag
actaaaaaggtgattggagcacttggtcactgcctaggtgtcaaagctgatgccttttat
ggagggattaatgtctgtgaggaccagcgaattctgtctagcggagttcaggtggttgtt
ggtactccttgtcatgttcttggcatgctgaaagggagagcactctgtccagatcacatt
agaatgctcatcttggatgaagcagatgacatattcagatgttgcaaggaccaggttgat
tcatggcttctcccaaccaaaacccagtttgggttcttctctgccactatgtcccacgaa
gctcttgagatgtgccgcaagttcatgaataagcctgtggaaatcattgtgccaagagat
gaagaacttgagggtatcaatgtcaagcagttctatgtcaacattgagaaggaagactat
aagcttgacaaactgtgtgatcttctggaccccgccgcaatcacacgtagcatcgttgtt
aacactcggcgtcaagccaagtcactgacaaaaagcattagagccaaggggtacactgtc
tcagcagctcatggaggcatgaaccagggagccagagaccaagctgttcaggatttccag
tctggatcgtcgagtatcctcatcgccactgatcctcgtggcatcgatgttctacatgct
cctgtggtcatcatctacgatctcccgacacaacaagtcagctacctccgtcatgttcaa
aggagcaggcaacacggaaggaagggtgcggccatcagcttcataactcatgctgatgag
cacaatttctctagtatcaggaagtttgtcaacacccaaatagaggagctaccctccaat
gtttctgattttttctga
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