Oryza brachyantha (malo sina): 102708662
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Entry
102708662 CDS
T02995
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102708662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102708662
03036 Chromosome and associated proteins [BR:
obr03036
]
102708662
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102708662
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102708662
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
102708662
Noncanonical PRC1 (PRC1.1)
102708662
Noncanonical PRC1 (PRC1.3/1.5)
102708662
Noncanonical PRC1 (PRC1.6)
102708662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_6
zf-UDP
zf-rbx1
zf-Nse
zf-RING_11
zf-C3HC4_5
zf-RING_10
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
102708662
NCBI-ProteinID:
XP_006644841
UniProt:
J3L4W4
LinkDB
All DBs
Position
1:complement(25791835..25797058)
Genome browser
AA seq
490 aa
AA seq
DB search
MPAQKRRLSSSPSSRPRDHVETNGMAASSSSSRAAGGSGSGGGGGGGGSGGGVSQAPRGG
AAAKRTADPQPQREGDSDAEFGGGVDGDSESSQSDGDMDEFIVVKLAEIRKEVQCPICLG
IIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPD
IDKYEEEELAFSEEERSRNKKIQATIEETIRRQSEAVGKKRSTAKATATVFARKYRRNMR
TRGRAKTVVPDIAPTGSDDEGREEANAIDATKESSSADDHCPDLRPKRGRKRPASRASPA
RTIGSSDNGFEETDELIGGKESFTTSPLRGEMLAWGKNGARSQTRHGSVGGSNGRMAKSG
RVAKLVDHLRTTDDMDKQFNLHLVLLPLDEQSTPNLEKPYISCRPTLSIRHLVQFIALQL
SLQVEELELFMRMDRCIGSVATKDSIGNGKMRISDGLERIGEDKLLLELHPSVTSHHGDL
ELLYALKAQG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcagaagcgacggctctcgtcgtcaccgtcttcgaggccccgcgaccacgtg
gagactaacgggatggctgcttcttcttcttcttcaagggccgccggcggcagcggcagc
ggcggcggcggcggaggaggaggaagcggagggggagtttcgcaggcgccgaggggaggt
gccgccgccaagcggacggctgacccgcagcctcagcgcgaaggcgattcggacgcggag
ttcggcggcggcgtggacggcgacagcgagtcgtcgcagagcgacggcgacatggacgag
tttattgtagtgaaattagcagaaattcgaaaggaggtccaatgccctatatgtttaggg
attatccggaagacaagaactgttatggaatgtttgcaccggttttgcagggattgcata
gataaatctatgcggctaggaaataatgaatgcccagcttgccgcactcactgtgcaagc
agacgttctttgagggatgatcctaattatgatgcattgattgctgccttgtatccagat
attgataaatatgaggaagaggaacttgctttcagtgaagaggagaggagtcggaacaaa
aagatccaagcaacaatcgaggaaacaattcgaagacagtcagaagcagttggtaaaaag
cgttcgacagccaaagcaactgccacagtttttgcaaggaagtacaggagaaacatgcga
acacggggtagagctaaaactgttgttcctgatattgcccctactggatcggatgacgaa
ggtagagaagaagcaaatgccattgatgccaccaaggagtcatcctctgctgatgatcac
tgtccagatttaaggccaaaaaggggtaggaaaaggcctgcatcacgagcatctcctgcc
agaaccattggcagcagtgacaatggctttgaggagactgatgaattaataggtggcaaa
gaaagtttcaccacctctccgctgcggggagagatgcttgcatggggtaaaaatggagca
cggagccaaacaagacatggcagtgttggtggttcaaatggcaggatggcaaagagcgga
cgcgttgcaaaattggtggaccaccttcgcactactgatgacatggataagcagttcaac
ttgcatcttgttcttcttcctcttgacgagcaaagtacccctaacttggagaagccctat
ataagttgtcgaccaaccttgtccattcggcatcttgtacagttcattgctcttcagttg
tctctgcaagttgaagaacttgagctctttatgaggatggaccgctgcattggaagtgtt
gcaacgaaggacagtataggtaatggcaaaatgcgcatatctgatggcctggaaagaata
ggggaggataaacttctattagagctccacccttctgttacttcccatcacggtgatctg
gaattgctgtacgctttaaaagctcaaggctag
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