Oryza brachyantha (malo sina): 102708966
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Entry
102708966 CDS
T02995
Name
(RefSeq) long chain base biosynthesis protein 1c isoform X2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00600
Sphingolipid metabolism
obr01100
Metabolic pathways
Module
obr_M00094
Ceramide biosynthesis
obr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
102708966
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obr01007
]
102708966
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
102708966
Amino acid related enzymes [BR:
obr01007
]
Aminotransferase (transaminase)
Class II
102708966
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
AF2212-like
Motif
Other DBs
NCBI-GeneID:
102708966
NCBI-ProteinID:
XP_006648080
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Position
2:26257616..26262622
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AA seq
482 aa
AA seq
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MEMVLPVANATAAALARVSAVFNAPLARAVVFGVHIDGHLVVEGLLIAAILFQLSRKSYK
PPKKPLTEREIDELCDEWQPEPLCPPIKEGARIEAPTLESAAGPHTTVDGKEVVNFASAN
YLGLIGNEKIIDSCVGSVEKYGVGSCGPRGFYGTIDVHLDCESKIANFLGTQDSILYSYG
ISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTHG
NKRTEKIRRYIVVEAIYQNSGQVAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGLAE
HYGVPIEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAIS
AVNHLEENPAVLANLRSNIALLHKELSDVPGLEIASNILSPIVFLKLKTPTGSAVADLEL
LEVIAEKVLKEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTESDISKVSASLKRVAASL
LQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtattgccagtcgcgaacgcgactgctgcagcgcttgcgcgggtttctgct
gtgttcaatgccccgcttgctcgtgctgtcgtctttggggttcatattgatggacacttg
gttgtggaagggcttctcattgccgccatattgtttcagctctccaggaagagctacaag
cctccaaagaaaccactcacggaaagggagattgatgaactctgtgatgagtggcaaccg
gagcctctctgcccacctatcaaggagggagcacggattgaggcacctacattagaaagt
gctgctggaccacatacaactgttgatggaaaagaagttgtaaactttgcatcggcaaac
taccttggtttgattggcaatgaaaagataattgattcctgtgttggctcagttgagaaa
tatggcgttggatcatgcggaccacgtggattttatggaacaattgatgtgcaccttgac
tgtgagagtaaaatagcaaatttcctgggaactcaagattcaatcttgtactcgtatggg
atatcgaccatcttcagtgtaattcctgccttttgcaagaaaggagatatcattgtcgct
gacgagggtgttcactgggcggtgcaaaatggtttacagctttcaagaagcactgtagtt
tatttcaagcacaatgacatggcttcactcgcaagcattttggaaaaactaactcatgga
aacaaacgtacagaaaagattaggcgctatattgttgtggaagctatttaccagaattct
ggccaagtcgctcccttggatgagatagttcgtttgaaggagaaataccggtttcgtgtt
atattggaggagagccattcttttggtgttcttggcaagtctggacgtggccttgctgaa
cattatggagttcctattgaaaaaatagacattatcactgctggaatgggcaatgcatta
gctaccgatggtgggttctgtacaggaagtgtcagagtggttgatcatcagcggctaagc
agctccggttatgttttctctgcttcgctaccaccatatcttgctagtgcagcaatttct
gctgtaaatcacttggaggagaacccagcagtacttgcaaacctaagatcaaacattgct
cttctgcataaagagttgtcagatgtaccagggctcgagattgctagtaatatcttgtca
cctattgtctttctcaaactgaagacacccaccggttctgctgttgccgacctggaactc
cttgaggttattgcagagaaggttttgaaggaagattcagtcttcattgcagcgacgaag
cgatccagtttggacaagtgtcgtctccccgttggaatccgcctatttgtgtcagctggt
cacacggaatctgacatctccaaagtatctgcatccctgaagagggttgcagcatcactg
ctccagtga
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