Oryza brachyantha (malo sina): 102709465
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Entry
102709465 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102709465
04121 Ubiquitin system [BR:
obr04121
]
102709465
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102709465
Membrane trafficking [BR:
obr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102709465
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102709465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
zf-RING-like
DUF7129
zf-HC5HC2H_2
FmrO
zf-C3HC4_3
DUF5795
RING_Ste5
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
102709465
NCBI-ProteinID:
XP_006654903
LinkDB
All DBs
Position
5:397460..399186
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AA seq
391 aa
AA seq
DB search
MASSPSSPSPSAGAAPAPAPASSSYWCYSCDRFVRAAPHEDSAVACPDCGGGFLEEMGAP
PPRAAYLRRPRAHHANDLRLRRTRRAAAAAAAGDRSPFNPVIVLRRSPAAVGGGDDDSLA
AATSFDLFYDDGAGSGLRPLPETMSDFLMGSGFERLLDQLTQIEAGGLARARENPPASKA
AVESMPTVTIAASHVGADSHCAVCKEPFELGVEAREMPCSHIYHQDCILPWLALRNSCPV
CRHEMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMD
GGFNNGGAPRRISWGSRQSRSTERSAIRRIFRNMFACFGRSHLSNSQASSSHSRPELNEA
SDRSATFSHGSRSRSTSWRLEDGHADAMVQR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccccctcctccccctccccctccgccggtgccgctccggcgccggcgccg
gcgtcgtcctcctactggtgctacagctgcgaccgcttcgtgcgcgccgcgccgcacgag
gactccgccgtcgcctgcccggactgcggcggcggcttcctcgaggagatgggggcgccc
cctccccgcgccgcctacctccgccgcccgcgggcgcaccacgccaacgacctccgcctg
cgccggacgcgccgggccgccgccgccgccgcggccggggaccgctcgccgttcaacccc
gtcatcgtgctgcgccgctcccccgccgcggtcggcggcggcgacgacgactccctcgcc
gcggcgactagcttcgacctcttctacgacgacggcgctggctccggcctccgcccgctc
cccgagaccatgtcggactttctcatgggatccggcttcgagcgcctcctcgaccagctc
acccagatcgaagccggtggcctcgcccgggcaagggagaacccgccggcctccaaggcc
gccgtcgagtccatgcccaccgtcaccatcgccgcctcccacgtcggcgccgactcccac
tgcgccgtctgcaaggagcccttcgagctcggcgtggaggccagggagatgccctgcagc
cacatctaccaccaggactgcatcctcccatggctcgcgctccggaactcctgccccgtc
tgccgccacgagatgccaaccgacgccgcgcgcccacggcccagcaatgccggaacagag
gaagagacggtcggtctcaccatatggaggctgccgggaggtggcttcgccgtcggtagg
ttcgctggagggaggaggcccgaggagagggagcttcctgttgtgtacactgagatggat
ggtggcttcaacaacggtggtgcgccgaggaggatctcctggggttcaaggcagagccga
tcaacggagaggagtgccattaggcgcatcttccgcaatatgttcgcctgctttggtcgc
agccatttgtcgaattcgcaggcctcctcttcgcattcgaggccggagttgaatgaggca
tctgaccggagcgccacgttcagccatggttcaagaagccggagcacgagctggaggctg
gaagatggccacgctgacgccatggtgcaaagatag
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