Oryza brachyantha (malo sina): 102709562
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Entry
102709562 CDS
T02995
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102709562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102709562
Spliceosome [BR:
obr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102709562
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102709562
NCBI-ProteinID:
XP_006654103
UniProt:
J3M4G7
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Position
5:3288945..3293018
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AA seq
411 aa
AA seq
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MEIQTSGKPIDLLMEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKNLWTWYEPYLK
DDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSLLPRVPLPVIRQVTSNLEKMKLPTKLSG
TTGDSSRHGSEDTARRPPSVKASLSVSFGQRAPHRASTRESSPVRRTVTHDDHHRSSSPS
RRSGSREVPDRDRSSRDRDRSSRDYDRSSHERDRSSRDYDRSSRDRDHDRDIRDYHRRDH
DSRDRDYRSRHSSSERQDDRRDRESSRHRRSSSRHRSRSRSRSRSRSRARTEERSSPFGD
PGKEKTAAISSNLAKLKDLYGDIAEKKDEGEAPRRDSCAEEVIRLGGPRWR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagatacaaacttcagggaagcccatcgatcttctaatggagaaggttctttgtatg
aacattctgtcttctgattacttcaaggagctctacaggctgaagacctatcatgaggtc
attgatgaaatatacaatcaagttgatcatgtggagccttggatgactggcaattgcagg
ggcccatccactgcattctgtctcctctacaaattcttcacaatgaagcttaccgtcaaa
cagatgcatggtttgttgaagcatcctgattccccatacatcagagctatagggttcctg
tatcttcgatatgttgcagatccaaagaacttgtggacctggtatgaaccctacttgaag
gatgacgaggaattctcccctggatctaatggtcgcatgacaaccatgggtgtctatgtg
cgtgatcttattcttggacagtactacttcgatagtcttcttccaagagttcctcttcca
gtgattcgtcaggtgacatccaatcttgagaagatgaagttgcccacaaagctttctggg
acgactggagattccagtcgtcatggatcagaagatactgcccgccgacctccttctgtg
aaggcttcactgtcagtttcctttggacagcgtgctccacatcgtgcatccacacgcgag
tcatctccagttcggcggacagtcacccatgatgaccatcatagatcttcctcgccatct
cgtcgtagtggaagccgcgaagttcctgaccgtgaccgctcaagccgtgaccgtgaccgt
tcaagtcgtgactacgatcgttcaagccatgagcgggaccgttcgagtcgtgactatgac
cgatcaagccgtgaccgggaccatgacagagacatcagagactaccatcggcgtgatcat
gatagcagggaccgtgactacaggtctaggcattcatcatcggaaagacaagatgaccga
agggaccgtgagagtagcaggcacagacgttccagctctcggcacaggagcagaagccgg
agtcgcagccggagcaggagccgcgcaaggactgaggagagatccagcccttttggagac
ccgggcaaagagaagactgctgccatctcgagcaacctagcaaagctcaaggacttgtac
ggtgatatagctgagaagaaggacgaaggtgaagcccctcgccgtgattcgtgcgcggag
gaggttatcaggctgggcggtccaagatggagatag
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