Oryza brachyantha (malo sina): 102709618
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Entry
102709618 CDS
T02995
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00280
Valine, leucine and isoleucine degradation
obr01100
Metabolic pathways
Module
obr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
102709618
Enzymes [BR:
obr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
102709618
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
HlyD_D23
ATPgrasp_ST
Biotin_lipoyl_2
ATP-grasp_4
ATP-grasp_3
QRPTase_N
Motif
Other DBs
NCBI-GeneID:
102709618
NCBI-ProteinID:
XP_015698359
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Position
12:15472644..15478515
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AA seq
735 aa
AA seq
DB search
MASRLLRPRRGWSAAPGPLLLLSRLLSSSSSEAEAAAVEKVLVANRGEIACRVMRTARRL
GIPTVAVYSDADRGALHVRAADEAVRLGPPPARESYLNAAAIVDAALRTGAKAIHPGYGF
LSESADFAQLCKAEGLTFIGPPPSAIRDMGDKSASKRIMGAAGVPLVPGYHGAEQDIELL
KLEADKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYIT
QPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAPAPNVTAKFRSHIGEAAVSAAK
AVGYYSAGTVEFIVDTLSGNFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGERLPL
SQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRPVPSTTTVRVETGVEEGDTVSMHY
DPMIAKLVVWGESRNAALVKLKNCLSNFQIAGLPTNVGFLQELAGHSAFEKGLVETHFIE
RYQNDLLSTSAQASSVAHEAAELGAILAAACICQKDHISSEVSLRDKTLSVWYTHPPFRM
HHFAKRLMEFELDRELGGSSDDLLKLSVTYRSDGTYFIESEDGSSGLDVKVDSRGDHDFR
VDVGGLQTDVTLAFYSKDNCNHIHIWHGKHHHHYRQMLRAEQLPDDSSQPSASSEARSHP
KGSVLAPMAGLVVKVLLKDGARVEEGQPVMVIEAMKMEHVVKAPRAGYVEGLKATAGQQV
FDSSVLFTVKETNTN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgcctcctccgcccccgccgcggctggagcgccgccccggggcccctgctc
ctcctctcgcggctcctctcgtcctcctcctccgaggcggaggcggcggcggtggagaag
gtgctggtggcgaacaggggggagatcgcgtgcagggtgatgcggacggcgcggaggctc
gggatccccacggtggccgtctacagcgacgccgaccgcggggcgctccacgtgcgggcc
gccgacgaggccgtgcgcctcggcccgccgcccgccagggagagctacctcaacgccgcc
gccatcgtcgacgccgctctccgcaccggcgccaaggctatccacccaggatatggtttt
ctttcagagagcgcagattttgcacagctttgtaaagctgaggggcttacattcattgga
ccaccgccttctgctatccgagacatgggtgataagagtgcttctaagaggattatgggt
gctgctggagtaccactcgttccaggttaccatggggctgaacaagatattgagctatta
aaactcgaagctgataagattgggtatccagttttgatcaaacccacacatggtggagga
ggcaaggggatgagaatagttcaaaggcctgaggactttgtggattctgtactgagtgct
caacgagaagctgcagcatcatttggcataaacacactgctggtcgaaaagtacattact
caacccagacatatagaagtccagatatttggagatcaacatggaaatgtgattcacctc
tatgagagagattgcagtctacaaagaaggcaccagaaaattattgaggaagctccagct
ccaaatgtgacagctaagtttcgttctcatattggtgaagctgctgtatcagctgcaaag
gcagttggttactacagtgctggaacagtggaatttattgtggatactctttctggaaac
ttctattttatggaaatgaatactcgactccaggttgaacacccagtgacagagatgata
gttggccaagatcttgttgagtggcaaatacgagttgcaaatggagagcgcctaccatta
tctcaggagcaggttccattaaatggacacgcatttgaagcccgaatatacgcagaaaat
gttccaaggggatttctacctgcaacaggaaccttacaccactacaggccagttccctct
accacaacagtaagagttgaaactggagttgaagaaggagatactgtcagcatgcattat
gatcccatgatagccaaactcgtggtttggggtgaaagtcgcaatgctgcgttagtcaag
ctaaagaactgcttgtcaaactttcagattgcaggtttgccgaccaatgttggtttcctt
caagaacttgcaggtcatagtgcctttgaaaaaggcctagttgagacacacttcattgaa
cgataccaaaatgatcttttgagtacttctgctcaagcctcgagtgtagcacatgaagca
gcagagcttggtgcgatcttggctgctgcctgcatttgccagaaagatcacatttcctct
gaagtatctcttcgtgataagacactttctgtgtggtacacccatccacctttcaggatg
catcactttgccaagcgtctaatggaatttgagttggatagagaacttggtgggtcgagt
gatgatcttcttaaactgtcggtcacatatagatctgatggcacctacttcattgagtct
gaagatggctcttctggtttggatgtcaaagtagatagcagaggtgaccatgacttccgg
gttgatgttggtggcctgcaaacagatgtaaccctagcattttattcaaaggacaattgc
aatcatatacacatctggcatgggaagcatcatcatcattacagacagatgttgagagct
gagcagttacctgacgacagttctcaacctagcgcttcctctgaggcgaggtcacatcca
aaggggagtgttttggcaccaatggcaggtctggtcgtaaaggttttgcttaaggatggt
gcacgggtggaggaaggtcagcctgtgatggtcatagaagcaatgaagatggagcatgtt
gtgaaggcgcctcgtgctggatacgtggaagggctgaaggctactgctggacagcaagtt
tttgactctagtgtccttttcaccgtgaaggagaccaacacaaactga
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