KEGG   Oryza brachyantha (malo sina): 102709619
Entry
102709619         CDS       T02995                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:obr04812]
    102709619
Cytoskeleton proteins [BR:obr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     102709619
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 eIF2A Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_DCAF12 WD_LRWD1
Other DBs
NCBI-GeneID: 102709619
NCBI-ProteinID: XP_006646391
UniProt: J3L4P0
LinkDB
Position
1:25336060..25344382
AA seq 832 aa
MDPEKRGYRLQEFVAHDAEVRSLVIGKKSSRVFITGSSDRKVNLWAIGKQAPLLSLSGHT
GSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTSVEFHPFGEFFASG
SSDTDLKIWDIKKKGCIHTYKGHRGAIKTIRFTPDGRWVVTGGEDNVVKVWDLTAGKLLH
DFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEDTGVRSMVFHPDG
KTLFCGLDQSLKVFSWEPVRCHDVVDMGWSNLADLSIYEGKLLGCSYHECRVGIWVADIS
LIRPYALGVLPKANFFAELVHSLDDSPSKPIDTTTKPIPALATTHPKNFYKVKETGTVTE
SGIRSSHLTPASLDKTKKDKSNVTPRRPDSSFKSSIQSSTAMRRTRAVDSPFTNKRTAER
NFAQRDVSLASRTGTANNSSTVRKGHLAESISVKDIYTTPQTVSMPVVMPRDILEDKTAG
SISRGIGGRAAVADDFRSPVHSRKLSVDSFAGDSVNAAKSMLTDPDDCSEDLSGLKFSFG
LTPYYKKEECNNMDKSDITQMAEKMDRTVSLEHQLQSNDSFESPCSTTETTKVKYVRGVA
VPLGKTKSLVERWEKREATNVECSPPTGSCGDRAVKSDGPSFSAEPSQAYENDLSTVDEV
MTPINLMESHDEFINAVKSRLTKLEMMRHVFDQNGIKGAIAAVAKLPDNAVQADVVSTLK
GKLDLFNLEIFSSFLPVLAGLLSSKTERHAVVSLELLLDLIKIFGPVIHSTLSAHSAVGV
DIQAEQRLQRCSRCFNHLQKIRQILHPLIMRGGQSAQLAQELNLSLQDLVVI
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggaccccgagaagcgcggatacaggctccaggaatttgttgcacacgatgctgaagtg
aggtccttggttattggcaagaagtcaagccgtgtgtttatcactggcagcagtgaccgt
aaggttaacctgtgggccattggcaagcaggcgccacttctgagcttatcaggccacaca
ggctcagttgaggctgttgagtttgatacagcagaggtgcttgtgcttgctggttcatca
aacggctccatcaagctctgggatttggaagaagcaaaagttgtgcgatctcttactggg
catagatcaagctgcacttctgttgaattccatccatttggcgagttttttgcatctggt
tcttcagatacagatcttaagatctgggatataaagaaaaaaggctgcattcacacgtat
aagggtcacagaggagcaattaaaacaatcagatttacacctgatggacgatgggttgtc
accggcggagaagataacgttgtaaaggtgtgggacctgacagctggaaaacttctacat
gacttcaagttccatagtggacaaatccggtgcattgattttcatcctcaagaatttttg
cttgcaacaggctcagctgatcggacagtgaagttttgggatctcgaaacttttgaattg
attggttctgctggacctgaggatactggtgttcgatctatggtctttcacccagatgga
aaaaccctattctgtgggttagaccagagcctaaaggtattctcttgggaaccggtaaga
tgtcatgacgttgttgacatgggatggagcaatttggctgatcttagcatttatgaagga
aagctcttgggatgctcctaccatgaatgccgagttggtatttgggttgctgatatatcg
ctcattcggccctatgctcttggtgttttacccaaagcaaatttctttgcggagctcgtg
cattctttagatgacagcccttcaaaaccgattgataccaccacaaagcccattcctgct
ctagcaacaacacatcccaaaaatttctacaaggtcaaggagacagggactgtaactgaa
agtggcattcgcagctcacatttgactccagcaagtttagataaaaccaagaaagataag
agtaatgtcactcctcgaagacctgattcttctttcaaatcatctattcagagttctact
gcaatgaggcgcacgagagctgttgatagtccattcaccaataaaagaacagcagagcgc
aattttgcacagagggacgtttctttagcatcccgtacaggaacagctaataattcttca
actgttagaaaaggtcatctcgctgagtcaatctctgtaaaagatatttacactacacca
cagactgtttctatgcctgttgttatgcctagagacatcttagaggacaaaacagcaggc
agtattagtagaggaattggagggagagctgctgttgcagatgatttccgcagtcctgtt
cattcaaggaaactctcagttgatagttttgctggtgatagtgtcaacgcagcaaagtcc
atgctaactgatcctgatgattgttctgaggatttgtctggcttaaaattctcttttgga
ctaactccatattacaagaaagaagaatgcaataatatggataaaagtgatattactcaa
atggcagaaaaaatggacagaacagtgtcgttggagcatcaacttcagtcaaatgattcc
tttgaatcgccatgttcaactacagaaacaaccaaggtcaaatatgtcagaggagtcgct
gtgccattaggaaaaacaaagtctcttgtcgagagatgggaaaagagagaggctactaat
gttgagtgctcaccaccaaccggttcttgtggtgatcgtgcagtgaaatctgatggtcct
tccttttcagcagaaccaagtcaggcatatgaaaatgacttgtcaacagttgatgaggtg
atgactccaatcaatttgatggagagtcatgatgagttcataaatgctgtaaaatctcgc
ctgacaaagttagagatgatgcgtcatgtctttgaccaaaatggtatcaaaggagcaatt
gctgcagtggcaaagttgccagacaatgctgttcaagctgatgtcgttagtactctgaag
gggaagcttgatcttttcaacctagagattttctcgagctttctgcctgttcttgcaggg
ttgctgagcagcaagactgaaaggcatgccgttgtttctttggagctgttgttggatctt
ataaagatttttggaccagttattcattcaacattgtcagctcattcagcagttggagtt
gatattcaggccgagcagaggttacaacgttgcagtcggtgtttcaaccatttgcaaaag
attcggcaaattctacatcccttgattatgcggggtggccaatcagcacagcttgcccaa
gagcttaacctgtctttgcaagacttggtggtgatctga

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