Oryza brachyantha (malo sina): 102709715
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Entry
102709715 CDS
T02995
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102709715
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GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
102709715
NCBI-ProteinID:
XP_040377227
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Position
2:16326896..16331245
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AA seq
713 aa
AA seq
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MSVSPSSMGGAGEAGVRTVVWFRRDLRVEDNPALAAAARTAGEVVPVYVWAPEEDGPFYP
GRVSRWWLSQSLKHLDASLRRLGASRLVTRRSADAIAALIELVRSIGATHLFFNHLYDPL
SLVKDHRVKELLAAEGIAVQSFNADLLYEPWEVVDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKRITPGEAWRRCPSDELVFEDESERGSNALLARAWSPGWQNADKALAAFLNGPLMD
YAANREKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLVWSNEGNHAGDESCALFLRSI
GLREYSRYLTFNHPCSLEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDAGMRELWAT
GWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELD
RIDNPQLEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPASVLQAAGIELGSNYPLPV
VELDAAKTRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPIAFPPELQMEVDRAPA
QPTTVHGPTTAGRRRQDQMVPSMTSSLVRAETELSADFDNNSMDSRPEVPSQALFQPRME
REETVDGGGGSGGGTAARTNGGGQQQHNFQTTIHRARGIAPSTSEASSSWTGREGGVVPV
WSPPAASGPSDHYAADEADITSRSYLDRHPQSHTMMNWSQLSQSLTTGWEVEH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtcgccgtcgtcgatgggcggcgccggcgaggcgggggtgcggaccgtggtg
tggttcaggcgggacctgcgcgtggaggacaacccggcgctggcggcagcggcgcgcacg
gccggggaggtggtgccggtgtacgtgtgggcgccggaggaggacgggccgttctacccc
ggccgggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgg
cggctcggcgccagcaggctcgtcacgcggcggtcagccgacgccatcgccgcgctgatc
gagctcgtccgcagcatcggcgccacgcatctcttcttcaaccatctctacgacccgctg
tcgctggtgaaggaccaccgggtgaaggagctgctggcggccgagggcatcgccgtgcag
tccttcaacgccgacctgctgtacgagccatgggaggtcgtggacgacgacggctgcccg
ttcaccatgttcgcgccgttctggaaccggtgcctgtgcatgccggacccggcggcgccg
ctgctgccgcccaagaggatcaccccgggcgaggcgtggaggcggtgcccgtcggacgag
ctggtgttcgaggacgagtcggagagggggagcaacgcgctgctggcgagggcgtggtcg
cccgggtggcagaacgccgacaaggcgctggcggcgttcctcaacggcccgctcatggac
tacgcggcgaaccgggagaaggccgacagcgccagcacgtcgctgctgtcgccgtacctg
cacttcggcgagctgagcgtccgcaaggtgttccaccaggtgcggatgaagcagctcgtg
tggagcaacgagggcaaccacgccggcgacgagagctgcgcgctcttcctccgctccatc
ggcctgcgggagtactccaggtacctcaccttcaaccacccctgcagcctcgagaagccc
ctcctggcgcacctccggttcttcccctgggtcgtcgacgaggtctacttcaaggtgtgg
cggcaggggaggaccggctaccccctcgtcgacgccggcatgcgcgagctctgggccacc
ggctggctgcacgaccgcatacgcgtcgtcgtctccagcttcttcgtcaaggtgctccag
ctcccgtggcgctgggggatgaagtacttctgggacaccctgctcgacgccgacctcgag
agcgacgccctcggctggcagtacatctccggctcccttcccgatggccgtgagcttgac
cgcatcgacaaccctcagctcgaaggctacaagttcgacccgcacggcgagtacgtccgg
cgatggctgccggagctggccaggctgccgacggagtggatacaccacccatgggacgcg
cccgcgtcggtgctccaggctgcagggattgagctcggctccaactacccgctccccgtc
gtggagctcgacgcggcgaagaccaggctgcaggacgcgctctcggagatgtgggagctc
gaggccgcgtcccgcgcggccatggaaaacggaatggaggagggcctcggcgactcctcc
gacgtgccgccgatcgccttcccgcccgagcttcagatggaagtggaccgagcgccggcg
cagccgactactgttcacggtccgacaacggctggccggagacgacaggatcagatggtg
cccagcatgacctcctcgctggtcagagccgaaaccgaactttcggcggattttgacaac
aacagcatggacagtaggccggaggtgccgtcgcaggctctcttccagcctcggatggaa
agggaggaaaccgtcgacggcgggggtggcagcggcggcggaacggcggccaggaccaat
ggaggtggccaacagcagcacaactttcagacaacaatacaccgtgcgcggggcatcgcg
ccgtcgacgtcggaggcatcaagcagctggaccgggagagaaggcggggtggtgcccgtc
tggtcgcctccggcggcgtcaggcccctcagatcattacgctgccgatgaagctgatatt
accagtagaagttatttggacaggcatccacagtcgcatacgatgatgaactggagtcag
ctctcgcagtcattgacaacaggctgggaagtggaacattaa
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