Oryza brachyantha (malo sina): 102709719
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Entry
102709719 CDS
T02995
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102709719
Spliceosome [BR:
obr03041
]
Common components
Common spliceosomal components
General mRNP proteins
102709719
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
102709719
NCBI-ProteinID:
XP_015690914
UniProt:
J3LK43
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All DBs
Position
3:complement(2480661..2488114)
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AA seq
562 aa
AA seq
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MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGDEVRDDGERRSKRSRSE
ENRDRDKDRDRHRDRDRDKDRDRHRSSRERRDRDRDEKERDKEKEREKDKERRSRDREKE
KEREREKEKEREREKEKDRERRSRSRSERRRDDEERERERYRDRDYRDRDVRRRKEEAAE
PEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD
VMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNITE
DQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKV
SAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGATTSLTTGIGGTGLN
TPVGLPPVSVLGAPPAAAPALQPTVPGLGSVSSLSLPIATQSIETAPPSECLLLKNMFDP
AVETDPDFDLDIKEDVQEECSKFGQVKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRW
FAGKMITATFMTPQQYSMKFPS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgactacttggagaagacggtggagggctccggggcgccgtcc
aacggcgccgccgctccgagatccgaggagaaggagcgcagctctcgccgccggagcggc
gggggcggcgacgaagtgcgcgatgacggcgagcgtagatccaagcgctctcgctcggag
gagaaccgagaccgcgacaaggaccgggaccggcaccgcgaccgcgaccgcgacaaggac
cgggaccggcaccgcagcagccgggagcgtcgcgaccgtgaccgggacgagaaggagaga
gacaaggagaaggagagggagaaggataaggagaggagaagccgggaccgcgagaaggag
aaggagagggaaagggagaaggagaaggagagggagagggaaaaggagaaggatagggag
cggaggagccggagccggtccgagcgacgccgcgacgacgaagaacgtgagcgcgaacgc
taccgcgatcgagactaccgtgatcgcgatgtcagacgtaggaaagaagaggctgcagaa
cctgaagcagatccagaaagagatcaaaggactgtgtttgcctaccagttatctctgaag
gctgatgaaagagacgtgtacgaattcttttcaagggctgggaaggtccgggatgtccgc
ctcatcatggaccgaaactcgcgccgttctaaaggagttgggtacatcgaattctatgat
gttatgtccgtaccaatggcgattgctctttctggccagctgcttcttggtcaacaggtg
atggttaaaccatcagaggctgaaaagaatttagttcagtcaaatgcttcttcgagtgga
gcagcttcaggcggggcaaggaagttgtatgttggaaatcttcactcaaatattactgaa
gatcaattaagacaggtcttcgaaccatttggtcaagtggaacttgtgcaattgcctcta
gatccacttactgggttatgtaaaggttttggttttgttcagtttgcacgccttgaagat
gcaaaggccgctcagagtctaaacgggcaacttgatatagctggtcgagtaattaaggtt
tcagctgtgacggaccaagcaggagtacaagtcagtggggtaactactggagatttggat
gatgatgaaggtggaggtttggcactgaacgctagctcaagagctcttttgatgcagaaa
ttagaccgtagcggagctacaaccagtttgactactgggataggcggtactggtttgaac
actcctgttggattaccacctgtatcagttcttggtgctcctccagctgctgcacctgcg
ctgcaacctacagtgcctggtcttggttcagtttctagtctgtctcttccaattgctacc
caatccattgagacggccccacccagtgaatgcttattgcttaaaaatatgtttgaccca
gccgtggagacggaccctgattttgatttggatattaaagaggatgtccaagaagaatgt
tccaagtttggccaagtaaaacacatttttgtggacaaaaatactgctggttttgtgtac
ctgcgatttgacagtataacagctgccatgagtgcacagaaagcattacatgggaggtgg
tttgcaggaaagatgattactgcaacatttatgacgcctcagcagtactcaatgaagttc
ccaagctag
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