Oryza brachyantha (malo sina): 102709720 Help Entry 102709720         CDS       T02995                                  Name (RefSeq) transcription factor bHLH140   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism obr  Oryza brachyantha (malo sina) Pathway obr03410   Base excision repair Brite KEGG Orthology (KO) [BR:obr00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     102709720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:obr03400]     102709720 Enzymes [BR:obr01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      102709720     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      102709720     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      102709720 DNA repair and recombination proteins [BR:obr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      102709720   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      102709720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 KTI12 AAA AAA_16 ABC_tran nSTAND3 AAA_5 Zeta_toxin SMC_N NACHT AAA_22 DUF5906 Dynamin_N NB-ARC AAA_24 MMR_HSR1 AAA_29 AAA_23 AAA_28 Motif Other DBs NCBI-GeneID:  102709720 NCBI-ProteinID:  XP_040378493 LinkDB All DBs Position 3:8757480..8760960 Genome browser AA seq 757 aa AA seqDB search MDPDGGGSTAVPTPSASTAGAAAVEEGGGKQVLVVLVGPPGSGKSTFAEAILGGSGAGRH WARVCQDTIGNGKAGTKIQCLKAAADALKEGKSVLLDRCNLEREQRADFLKLGSHVHVDV HAVVLDLPAKVCISRSVNRRGHEGNLQGGMAAMVVNRMLKKKETPLLTEGFSRIMFCKDD NEIKKAVDMYNALGPSDCLDPGIFGQTTKGPIQVGIMKFLKKPESSEKSSGPKVTPSESM PQMQNHFSKQKTLEAGGTCPVEGENNKKKIEEQSRESIPSDISSRTLAFPSISTADFQFD LDRASDIIVDAVSIVLQKYDNIRLVLVDLSQRSRILSLVKDKAAKKNINSSRFLTFVGDI TQLHSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAGEDLHRATKECADTLRPGSSVTV PLPSTSPLHQREGVTHIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFESFVAIAH NSCIEKQNTEPVLEKPVTGVTSPTDLKMKRGCSYDSERTKKHKLVQPNIPSNQAREGDNK RSGVTSTKTWGSWAQALYELAMHPENYKNSDSILEISDDFVVLNDLYPKAKRHVLIVSRR DGLDSLADVKKEHLPLLRTIHSAGVKWAQKFLEGDSSLVFRLGYHSVPSMRQLHLHIISQ DFNSSSLKNKKHWNSFTTTFFLDSVDVIEEINQHGSANISSDDRVLAMELRCHRCRSAHP NIPKLKSHIANCKSSFPYHLLQKDRLLSSSTMHMDCS NT seq 2274 nt NT seq  +upstreamnt  +downstreamnt atggatccggacggcggcggctccacagccgttccgacgccatcggcatcaaccgcaggt gcggcggcggtggaggaaggcggcgggaagcaggtgctggtggtccttgtgggtcccccc ggcagcggcaagtccaccttcgccgaggccatcctgggtggctccggtgctggccgccac tgggctcgcgtctgccaggatacgatcggaaacggaaaagctggaacaaaaatacagtgc ttgaaggctgcagcagatgctctgaaggagggcaagagtgttctccttgaccgttgcaac ttggaacgagagcagcgcgctgactttctgaagcttggcagccatgtccatgtggatgtg catgctgttgtcttggatctccctgcaaaagtttgtatatcgcgctcagtaaaccggagg ggccatgaaggaaacctgcagggtgggatggctgccatggttgtgaaccgcatgctgaag aagaaggaaacaccattgctgactgaaggtttctctcgtataatgttctgtaaagatgac aatgagattaaaaaggcggtcgatatgtataatgcattagggccttcagattgtcttgat cctggaatttttggtcagactaccaaagggcctatacaagttgggataatgaaatttcta aagaaaccagagagttctgaaaaatccagtggacctaaggtgacaccaagtgaaagcatg ccacagatgcaaaatcatttttcaaaacagaaaacccttgaagctggtggtacctgccca gtggaaggtgaaaacaataagaagaaaattgaagagcaaagtagagagagcattccatcg gatatcagttctcgcactctggcatttccatcaatttctactgctgactttcagtttgat cttgacagagcatcggatattatagtagatgcagtgtctattgtcttgcagaaatatgat aatatacgattagttcttgtagacctaagccagagatcaagaatactgtcattggtcaag gacaaggctgctaagaagaacattaactcaagcaggtttctaacttttgtcggagatatc actcagctgcactcaaaaggaggccttcgatgtaatgtgattgctaatgctgcaaactgg aggttaaaacctggaggcggaggggttaatgcagcaatatacaatgctgctggggaagat ttacatcgtgcaaccaaagagtgcgctgacacattgagacctgggagctctgtcactgtc ccactcccatcaacttctcctcttcatcaaagggaaggtgtgacccatatcatacatgtg cttgggccaaacatgaacccaatgcgaccggattgtctgaagaatgactatactaaaggt tctaagattcttcatgaagcatatacttcactttttgagagttttgtagccattgcccat aatagctgcatagagaagcagaacactgagcctgttttagaaaagccagtgactggagtg acatcacccactgatttaaaaatgaagcgagggtgcagctatgattctgagaggaccaaa aaacacaagttggttcaacctaatataccctcaaatcaggctagagagggagacaacaag aggagtggtgttactagtactaagacttggggatcctgggcccaagctctttacgagctt gcgatgcacccagaaaattacaagaactctgattctatcctggagatatctgatgacttc gttgttctgaatgacctctaccccaaggccaaaaggcatgttttgattgtatctaggagg gatggtcttgattctctagcagatgtcaagaaagaacacttacctttgctgaggacaata cattcagctggagtcaaatgggcacagaagttcctagagggagattcatctttggtattc agactcggataccattcggttccatccatgcggcaattgcacctgcacatcataagccag gacttcaactctagtagtttgaaaaacaagaaacactggaactccttcaccacgacgttt ttccttgattctgttgatgtcatcgaagaaatcaaccagcatggatcagcaaatatcagc agcgacgacagggtgctggcaatggagcttcgatgccacagatgcaggagtgcccatccg aatatcccaaagctcaaatcccacattgcaaattgtaaatcttcatttccttaccatctt ctgcagaaagacaggctgttgtcatcgtcgacaatgcatatggattgcagttag

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