Oryza brachyantha (malo sina): 102709771
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Entry
102709771 CDS
T02995
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
obr04812
]
102709771
Cytoskeleton proteins [BR:
obr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102709771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT122_1st
eIF2A
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
102709771
NCBI-ProteinID:
XP_015697397
UniProt:
J3N3Q2
LinkDB
All DBs
Position
10:complement(12916983..12923673)
Genome browser
AA seq
872 aa
AA seq
DB search
MDTKRAYKLQEFVAHASDVNCVKFGRRTSRILITGGEDQKVNLWAIGKPSAILSLSGLTS
PVESVSFDSSEVMIGAGSSSGTIKVWDVEEAKVVRTFTGHRSSCASLDFHPFGEFFASGS
SDTNMKIWDMRKKGCIHTYKGHTRQIDVLKFTPDGRWIVSGGSDNSVKIWDLTAGKLLHD
FRIHEGPINCIDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPENSREYFEPASVVRS
MTFNKDGKSLFCGLHESLKVLSWEPIICHDVVDVGWSTLGDLIVHEGKLLGCSYNQSCVG
IWVVDLTKIDPYAVNNAEAHLNGSINRSMQADNSMSSMLGKLSVSRSPAKETSSNTLLKP
SISMSASKEVPAPATSAVAKKLPKVPMTSNLRLTRSDSLPVVSPRVRLNPKFSDDQKRKT
DYVVPVTAPRIHSKLDLSTGAGVYRRNSLPSFAPTNRPRSKISAYSSEGSSLIPIVVPRH
SPKVDACPSLSKVLTTDLTIVEPQSIKRGGLAVDCGQEDGKLLRVTDSRSSSMVVQSGCR
RVASDVTRKENPETALTANMDHDFRQKAPETENMQQYTFQSEPISSKCKYISGGGDINLS
GPAFTESVQSNEVGDWYNASSFVKPNLTIGRNPETSYINKRAVFPLRQSADSSERHSVEH
LPSNLSASYERSQYVSTLNNLRWRSSIAGQQSVSAGDEDGIVDLMENHQEFIHAVKSRLT
KLEVVYRCWKNNDIKGSLDATQRMQDLAVSADIISVLMENTNCITLDVCTCVLPLASSVL
ESSCDRHLKVALEMIHKLVKSFGTTISSTLSYTAAVGVDIEAEQRFLRCNLCFQELIKVH
SILITMARRQGEVGRSAQELSLFLQDMFQLDR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaagcgcgcgtacaagctccaggagtttgtcgcgcatgcttccgatgtcaac
tgtgtcaagtttgggaggaggacatcaagaatcctcatcactggtggggaggatcagaag
gtcaatctttgggccataggcaaacccagtgccatcttgagcctgtcaggccttacaagt
ccagttgaatcagtgagctttgactcatctgaagttatgataggcgctggatcatcaagt
gggaccataaaagtatgggatgtggaggaagcaaaagttgttcgtactttcactggacat
agatcaagttgtgcatcccttgatttccatccctttggagaattcttcgcttctgggtct
tcagacacaaacatgaaaatatgggatatgcggaaaaagggatgcattcacacatacaag
ggtcacacacggcagattgatgtgcttaaattcactcctgatggccggtggattgtctct
ggtggatctgataactctgtaaagatctgggatttgacagctggaaagctcttgcatgac
tttaggattcatgaaggcccaattaactgcatagattttcacccccacgagttcttactg
gctacaggttcagctgataagacggttaagttttgggaccttgaaacttttgagttgatt
ggttcttctggacctgagaatagccgggaatactttgagccagctagtgtagttcggtct
atgacattcaacaaagatggtaaatcacttttttgtggactacatgaaagcttaaaggtt
ctttcatgggaacctattatatgccatgatgtagttgatgttggctggtccacattaggg
gatctaattgttcatgagggaaaacttcttggttgctcatataaccaaagttgtgttgga
atatgggtcgtggacttgacgaaaatcgatccatatgctgttaataatgctgaagcacat
ttgaatggaagcataaataggtcaatgcaagctgataatagcatgtcatcaatgttgggg
aagttatcagtttccagaagcccagccaaggaaacatcttccaatactttgcttaaaccc
tcaatctcaatgtctgcttcaaaagaagttccagctccagctacttctgcagtggcaaag
aaattaccaaaagtgcctatgacaagcaatcttcggctcaccagatctgattctctgcca
gttgtttctcccagggttagattaaacccgaagttctctgatgaccagaagaggaagact
gattatgttgtgcctgtaacagctccaagaattcactctaaattggatctttctacaggt
gctggagtgtaccgtcgtaactcactaccatcgtttgctcccacaaatagaccaaggtcc
aaaatatctgcatatagtagtgaaggatcgtcgctcatacccattgttgtccctaggcat
agccctaaagtggatgcttgtcccagtctcagtaaagttctcactactgacttaacaatt
gttgagcctcaaagtataaaacgaggtggtctggccgtggattgtggacaagaagatggt
aagttgttgcgtgtgactgattcaaggagctcgagtatggttgtacaatcaggctgtaga
agagtagctagtgatgttacgcgtaaagaaaatccagagactgctttgacagctaatatg
gatcatgacttcaggcagaaggcccctgaaactgaaaatatgcaacagtatacatttcag
tcagagcccattagttcaaaatgtaaatatatttcaggtggtggagacattaacctatct
gggccagcctttactgagagtgttcagtctaatgaagttggtgactggtataatgcatct
tcttttgtaaaaccaaatttgactattggtaggaatccagagacttcatatatcaacaaa
agagcagtgtttccattgagacagtcggcagattcaagtgaaaggcactctgtggagcat
ctaccttccaatttgtctgcaagttatgagagaagtcagtatgtatcaacattaaataac
ttgaggtggcgctcttcaattgctggacaacaaagcgtgtcagctggtgatgaagatggt
attgttgacctgatggaaaatcatcaagaattcattcatgcagtgaagtctcggttaaca
aaactagaggtggtttacaggtgttggaaaaataacgacataaagggatctcttgatgct
acacagaggatgcaggatcttgctgttagtgctgatataattagtgttctgatggagaat
actaactgtatcaccctagatgtgtgtacttgtgtcctacctcttgcctccagtgttctt
gaaagcagttgtgacaggcacctgaaggttgccttggagatgatccataagcttgttaaa
agctttggtactaccatatcttcaactctgtcatatactgcagcagttggtgtggacata
gaggcagagcagaggttcctgcggtgcaatttgtgcttccaagagctgataaaagtgcac
agcattctcatcaccatggcacggcggcaaggcgaggttggaagatcagcacaggagcta
agcctctttcttcaggatatgtttcagctggatagatga
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