Oryza brachyantha (malo sina): 102709940
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Entry
102709940 CDS
T02995
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102709940
03036 Chromosome and associated proteins [BR:
obr03036
]
102709940
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102709940
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102709940
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102709940
microRNA pathway
RISC loading complex
102709940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
102709940
NCBI-ProteinID:
XP_006657105
LinkDB
All DBs
Position
6:16171908..16184743
Genome browser
AA seq
974 aa
AA seq
DB search
MLEVLDMAPPRHQPAAGKGGGHGHGHGHGGGGGGPAARKQPLQSSMAQPKAETAGAAAAA
VALPEGGKKCGGGGRRRGGRGRGGRAGEPRPAPAPAVAGAAPMARAVIGPPVPSKGLSFC
RRPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRSVNRAIMAELVRLYRESD
LGMRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYKVAIKFAARADLH
HLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKPQRLGDGLQSWCG
FYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSDANRIKIKKALRG
VKVEVTHRGNVRRKYRISGLTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHPHLPC
LQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCRRPREQEMDILQTVQQNG
YEQDPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGC
KVSHWACINFSRSVQETTARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVEKALKHV
YNIALNKLKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKISKQYLA
NVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQ
DWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRI
IFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRS
STDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTL
TNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPELSENQTTSKSSTGTNGTSVKPL
PAVKEKVKRVMFYC
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggacatggcgccgccccggcaccagccggcagctggcaaggggggc
ggccacggccacggacatggccatggtggtggtggtggtgggccggcggcgaggaagcag
ccgttgcagagcagcatggcgcagcccaaggcggagacggcgggggcggcggcggcggcg
gttgcgctgccggagggagggaagaagtgcggcggtggcgggaggcggcgtggcgggcgc
gggcgtgggggcagggcgggggagccgcggccggcgccggcgccggccgtggctggggcg
gcgcccatggcgcgcgccgtcattgggccaccggtgccgagcaaggggctatctttctgt
cggcggccggggttcgggacggtgggcgcccggtgcgtcgtgaaggccaaccacttcctc
gccgagctgcccgacaaggatctcacccagtacgacgtcaagatcacgccggaggtgagc
tcccggagcgtcaaccgggccatcatggcggagctggtccgcctctaccgcgagtccgac
ctcggaatgcgcctgccggcctacgacgggcgcaagaacctctacaccgccgggacgctc
ccgttcgacgcgcgcgagttcgtcgtgcgcctcaccgacgacgacgacggcaccggcgtc
cccccacgggagagggagtacaaggtggcaatcaagttcgccgcgcgcgccgacctccac
cacctccggcagttcatcgccggccggcaggccgacgcgccgcaggaggctctccaggtc
ctcgacatcgtgctccgggagctcgccaaccgcaggtacgtctcgatagggcggtcgttc
tactcgccggacataaggaagccgcagcggctcggcgatggcctgcagtcgtggtgtggg
ttctaccagagcatccggccgactcagatgggcctgtcgcttaacattgatatgtcatct
accgcgttcatcgagccgctaccggtgatcgagtttgtggcccaaatattagggaaggat
gtcatatcaaggccattgtcggatgcaaaccggatcaagatcaagaaagctttgcggggt
gtgaaagttgaagtcactcaccggggaaatgtaaggcggaagtatcgcatttcagggctg
acaacacaaccaactcatgaactgattttcccaattgatgatcaaatgaacatgaaatct
gtggtagagtatttcaaggaaatgtatggcttcaccattcagcatccccaccttccttgc
cttcaggtgggaaatcaaaagaaggcaaactatctaccaatggaggcctgtaagattgtc
gagggtcagagatatacaaagagattgaatgaaaagcagatcacctcactgctaaaggtt
acttgccgcaggcctagagaacaggagatggatattctgcagacagttcaacaaaatgga
tacgagcaagacccttacgcaaaagaatttggaatcaacataagtgagaagctaacctct
gttgaagctcgggtccttcctgcgccgtggctgaaatatcatgacactgggaaagaaaag
gagtgtttaccacaagttggtcagtggaacatggtgaacaagaaagtgataaatgggtgc
aaggtgagccattgggcttgtataaatttctcgagaagtgtgcaagaaaccactgctcgg
ggattctgccaggagttagcacaaatgtgtcagatttcgggcatggagttcaacagtgag
cctgtgataccaatatactcagctagaccagatcaagtagaaaaggcacttaagcatgtg
tataatatagcattaaacaaactcaagggtaaagaacttgaacttcttttggccattctc
cctgacaacaatggttctttatatggtgatatcaagcgtatctgtgaaactgatttgggg
ttgatatcacaatgttgcttaaccaaacatgttttcaagatcagtaagcagtacctggca
aatgtctcacttaaaatcaatgttaagatgggaggaagaaacaccgtactcttggatgca
ataagttggaggattcctttggtcagtgacataccaactattatatttggtgcagatgta
acacatcccgaaactggggaagactctagtccatcaattgctgctgttgttgcatctcaa
gactggccagaagttacaaagtatgctggattggtgtgtgctcaggctcatcggcaagag
ctcattcaagatctttacaagacatggcatgatcctcaaagaggcactgtaacaggaggc
atgatcagggagctcttaatatccttcaggaaggccactgggcaaaagccactgagaata
attttctacagggatggtgtcagtgaaggccaattctaccaagttctcctttatgagtta
gatgctatccgcaaggcatgtgcatctctagaaccaaattaccagcctcctgtaacattt
gtggttgttcaaaagcgtcaccatacaagactcttcgcaaacaatcacaaagacagaagt
agcacggacaaaagtggaaacattttgcctggaactgttgttgattcaaagatctgccat
ccaacagagtttgatttctacctctgtagtcatgctggaattcagggaacaagtaggcca
gctcactaccatgtcctctgggatgagaacaatttcacagcagatgaaatgcagacgtta
acaaacaacctttgctacacttacgcacggtgcacacgttctgtttctgttgtcccaccc
gcatattatgcgcacctggctgcatttcgagcacggttctacatggagccagagttgtcg
gagaaccagacgacgtcgaagagctccaccgggacgaatggaacctcggtgaagccattg
cctgcagtgaaggagaaggtgaagagggtgatgttctactgttga
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