Oryza brachyantha (malo sina): 102709948
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Entry
102709948 CDS
T02995
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102709948
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
102709948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
102709948
NCBI-ProteinID:
XP_040381699
LinkDB
All DBs
Position
7:17421772..17432543
Genome browser
AA seq
1816 aa
AA seq
DB search
MSASGFGRDAGPVNRGPGTAAFAFGAGAATPPATPAPFTSPRPVAPVGAAAAVSRFPSPR
PRPQLAAAVATPRTPATSPVPIPSSSAARPAIAPGVANPVRFPSSRPVVNPGVSAATVRH
VARHVQPPPRPAASSIHSPVHPVVSSRSRSTSPLSNQRVDSPSGYDNGMGQRRLVNYADP
LFENGSAPIEKMRGQPSEFGKTARSSPLNITSNFRPPSGFQNYYPVLAADPLEYKPNVKP
SMFGNQNQSLFNDVQAASSPPLSNNRLVPGTGRLRPAFGGGASPAVLGDESRYDNSAQSI
MALQEMSEHMRPSSQRFPSPSQSRSLDHNISKRSRSPTLSHQDADGAEAHNNAGANARRL
IDYRDSLFDDGMVETSKRMKSPSLEFTNLIKSPSSGGDNTRPSPAGSRGNNAVQNRHSRA
DIQKASSSVPKVENQVQSHIGDARSPPYQSGSYSNERNTAAVSPPKTSTPGASKRIGTPP
LDFTDDDNMIPSTETEREKQAKAKRLARFSVELNRPVDNINDFAKPQKDSSDKHKQSSSM
GKITTESNDGTNERSMADADSRGLAAIVGLCPDMCPEPERAERERKGDLDRYERLDGDRN
QTTELLAVKKYNRTAERDADLIRPLPVLQKTMDYLLSLLDHTYDDNFLGLYNFLWDRMRA
IRMDLRMQHFFNQYAISMLEQMIRLHIIAMHELCEYNKGEGFSEGFDAHLNIEQMNKTSV
ELFQMYDDHRREGVLFPTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMSREIRGSPD
ILFAREVARACRMGNFIAFFRLARKATYLQACLMHAHFAKLRRQALASLHSGLQNSQGIP
ISQVVEWLAMEDEDIESLVEYYGFGLRQYEELYLVKEGPFLNSETDFSSGCSQLVHLKKS
QRIINDVSSGPACASTCQKETVAPYSGGFASPTRTREQVKTQPSLLAKRDFGMPFTASVS
PTSARQTTSLYSGPFSPKAGNKQFSLPSSSPISPTSGKKESIPVLFSTPSPHTSNQTIFS
RTGWIDEQRGASPKAESNTKVADDFIPEDQDDSVVGFPQGQPDVLWPQANIQQDNALEET
NFLRPLADVSLNYSSMHGEENEFRPDSSGIDMCMDEESLSDRQVNLVQPESFADSQSSDS
DHEEYDDHKIGYRAADNVLPVVVSPKKTVSNERLKIILRKWRQCAMDKRFLREQKNALAI
AALSSLSLGPPVHQTAVVPLHTVHDLDIRHAFEERHSRQQLSLSPLNVSELAGPILTERN
PDARCICWKLLVLVPPDNMEFKNSNYASKWLLKKIMGSGNDDAGLLFSSTDLSIWTNWNS
SPDTCCLSVARASDQQVIGNDVAYGTNCIIFLVSETIPWEMQKAQVSSLLASIPAKSNLP
LLILSGDTYTEEYDYASRSIIDSLGLSSLSEEKIASCLVVFLVADNMEGYANGFFDDEKL
RGGLKWLTKNMPLQPDVTLVKTRELLLNYLNPSLELLNSRAAPQVCPEHCISVYNKSVNQ
LAEEVSAAAYTASNQCPAPEINLLERSSSERMFAEMFLPSMGWSLPSRIHPLLVTIKSCK
LPEFSYDLSWLNQGSHMGSQIQDQKLYLEECLTKYLTQSAHLLNEAQAATEVKVIVQKGV
GLELRGSHYRLVPRWVTIFRRIFNWRLARLSTGEFSEAYVLSQNLYQTSSADPNPKFPNR
GGTQHDLSASSNTTDDEEVPILEDRSMTPSVSSGLSLDEIIEISCDLDAVSVPPAKPLPP
QLPTQLLHEPQPPAATNGGVNGVGVLGAGDGMRMRMPRRPELKDLVPMERDDKLARLLEQ
CSKVQDRIDDTLSIYF
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatccggcttcggccgcgacgccggccccgtcaaccggggcccgggtaccgcg
gccttcgccttcggcgccggcgccgccaccccgccggccacccctgctcccttcacatcc
cctcgcccggtcgctccggttggggccgccgccgccgtatctcgcttcccgagtcctcgt
cctcgcccccagctcgctgccgcggttgcaacccctcgcactcccgccacttctcccgtt
cccataccctcatcctctgccgcacgcccggccattgctcccggcgtcgccaatcccgtg
cggttccctagctctcgtccggtcgtcaatccaggcgtgtccgccgctactgtacgccac
gtcgctcggcatgttcagcccccgccgaggccagctgcatcatcaatacacagtcctgtg
catcctgttgtttcctcaaggagcaggtccacatctcctctatcaaatcagcgtgtcgat
tctccttcaggctatgataatggtatgggacaaagaaggttggtaaactatgcagaccca
ctgtttgaaaatggaagtgcacctatagagaaaatgaggggacagccttcagagtttgga
aaaacagcaagatcatcacctttaaacattaccagcaattttagaccaccatcaggcttc
caaaattattaccctgtgctggctgctgatcctcttgaatacaaacctaatgtaaaacct
tcgatgttcggaaaccagaaccagtcacttttcaatgatgtacaggcagcttcctctcct
cctttgagcaacaaccgtttagttcctggaactggcaggctgcgtcctgccttcgggggt
ggcgcgtctccagcagtgcttggtgatgagagtcgctatgataattcagcgcaatcaatt
atggcactgcaagagatgagcgaacatatgcgaccatcatcacaaagatttccctctcca
tctcaaagtcgatcattggatcataatatttcgaaaaggtctaggtcacctactttgtcc
catcaggatgctgatggtgctgaagctcataacaatgccggtgcaaatgctagaagactg
atagactatagggattccttatttgatgatggaatggttgaaacttccaaacgaatgaaa
tcaccttcgttagaattcacaaacttgatcaaatcaccatcttcaggtggagacaatact
agaccgtcacctgcaggttcccgaggcaacaatgcagtccagaatcgacattcacgtgct
gatatccagaaggctagttcatctgttcccaaggttgaaaatcaagtgcaatctcatatc
ggtgatgcacgttcaccaccatatcagagtggttcttattccaatgaacgtaacacagct
gctgtttctccaccaaagacttctactcctggtgctagcaaaagaattgggaccccaccg
ctggactttactgatgacgataacatgatcccttcaacagaaactgagagagaaaaacaa
gcaaaagccaagcgtttggctcgtttcagtgttgaattaaacagaccggtcgacaatatt
aatgattttgcaaaaccgcagaaggactcttcagacaagcacaaacaatcttcttcaatg
ggaaaaattacaaccgaatcaaatgatggtaccaatgaaagatctatggctgatgcagat
tcccgagggttagctgcaattgttgggctttgtcctgatatgtgcccagaacctgaaagg
gcagagcgtgaaagaaaaggagatcttgataggtatgagagattagatggagacagaaac
caaaccactgagcttcttgctgttaaaaagtataataggaccgccgagagagatgcagat
ttgataaggcctctgccagttctgcagaaaacaatggattaccttcttagcttactggat
cacacgtacgatgataacttcttgggcttatacaacttcttatgggaccggatgcgagcg
ataagaatggatcttagaatgcagcattttttcaatcaatatgctatttctatgttggag
caaatgataaggctccatataatagcaatgcatgaattatgtgaatacaataagggagaa
gggttttcagaaggttttgatgcacaccttaacatcgagcagatgaataaaacgtcagtt
gagctatttcaaatgtatgatgaccacaggagagagggtgtattgttcccaacagaaaag
gagttccggggctattatgcactgctaaagttagacaagcatcctggttacaaggttgaa
cctgctgagttatcgctagaccttgctaagatgtcccgtgaaatcagaggcagtccagac
atcttgtttgcaagggaagttgcaagagcttgcagaatgggaaactttattgccttcttt
cgtcttgcaaggaaagcaacgtacttgcaggcttgtttgatgcatgctcactttgcaaag
ctaagaaggcaagcgctggcttccttgcacagtggtcttcagaatagccaaggcatccct
atttcacaagttgttgagtggcttgctatggaggatgaggatattgaaagtcttgtagaa
tactatggttttggattgaggcaatatgaagaactgtacttagtgaaagaaggccctttt
cttaacagcgagactgatttctcatctggctgttctcaacttgtgcacttgaagaaatca
cagagaatcatcaatgatgtttcttctggtccagcatgtgcttctacttgccaaaaagag
actgttgcgccatattctggtgggtttgcttcccccactagaacacgagagcaggttaaa
acacagccttctcttctggccaaaagagactttggcatgccatttactgcatctgtttct
cccacttctgcgagacagactacctccctgtattctggtcccttttccccaaaagctggc
aacaaacaattcagtttgccatcttcaagtcctatatccccaacttctggcaaaaaggag
agtatccctgtactttttagtactccttctccacatactagcaatcaaactatattctcg
cgcacaggatggatagatgaacaaaggggagcttcaccaaaagcagaaagcaacacaaag
gtggctgatgattttatacctgaagatcaggatgatagtgttgtagggttccctcaaggg
caacctgatgtactgtggccacaagctaacattcaacaggacaatgctttggaggaaacc
aattttttacgtcctcttgcagatgtctccttaaattactccagtatgcatggagaggaa
aatgaattcaggccagatagttccggtattgatatgtgtatggacgaggagagtttatca
gaccgacaagtcaatttagtacagcccgagtcatttgcggattcacagtcatctgattct
gatcacgaggaatatgatgatcacaagattggttacagagcagcagataacgtgttaccg
gttgttgtatctccaaagaaaactgtttccaatgaaaggttgaagataatactgaggaaa
tggaggcagtgtgctatggacaagagatttcttagagagcagaaaaatgctcttgctatt
gcagcattgagttctctgtctcttggtccaccagttcaccaaactgcagtggtgccattg
cacacagttcatgatctggacattcgtcatgcatttgaagagagacactcaagacaacaa
ctatcgttgtcacctctaaatgtctcagagttggctggtcctattttaacagaaaggaac
cctgatgcaagatgcatctgctggaagcttcttgtactagttccacctgataacatggaa
ttcaagaacagcaattatgcctcaaaatggttgctcaaaaaaatcatgggctctggaaat
gatgatgctgggttgcttttttcttcaacagacctatcaatttggacaaactggaacagt
tctccagacacatgttgtctatctgttgctagggccagtgaccagcaagtcattggtaac
gacgtagcctatggcacaaactgtataatattcctggtatctgaaactattccgtgggaa
atgcagaaggcacaggttagcagtctgttagcatctatacctgctaaatccaatcttcct
ctgctgattttgagtggcgacacatacactgaagagtatgattacgcgtcacggagtatc
attgacagtcttggcctcagttctttgagcgaagaaaagattgcatcatgcttggttgtt
tttctagttgcagataacatggaaggttatgccaatgggttcttcgatgatgagaaatta
cgtgggggtctgaagtggctgacaaaaaacatgcctctgcagcctgatgtcactcttgtg
aagacccgggagttgcttctgaactacttgaacccatcacttgagctgcttaacagccgt
gctgcacctcaagtttgtcctgagcattgcatttcagtatacaacaaatctgtcaaccag
ctcgcagaggaggtctcagcagcagcatacacagcttctaaccaatgtccagcacctgag
attaaccttctggagagatcgagcagtgagaggatgttcgcagaaatgttcctacctagc
atgggatggtcactaccatcaagaatacatccattgcttgtaaccataaagagttgcaag
cttccagagttcagttacgatttgtcttggttaaaccaaggctctcacatgggcagtcaa
atccaagatcagaagttataccttgaggagtgcttaacaaaatacctgactcaatcagct
catttgctaaatgaagcccaggcggctaccgaagtgaaggtcattgtgcagaaaggcgtc
ggtctcgagctccgtggctcacattaccgccttgtgccaagatgggtgacaatcttccgc
cgaattttcaactggaggctagccaggctctccacaggagagttctcagaagcttatgtc
ctgagtcaaaatctctaccaaacatcgtcagctgatccaaatccaaagtttccgaacaga
ggaggaacccagcatgatctctctgccagcagcaacactacggatgatgaggaggtgccc
atcctggaggatcgcagcatgacgccttctgtgtcatctggcctctccctagatgagatc
atcgagatcagttgcgatctcgatgcggtcagcgtgccaccggcgaaaccccttccaccc
caactgcccacccagcttctccatgaacctcaacctcctgcagccaccaatggcggggtg
aacggggttggggtgctcggagctggtgatggcatgcggatgcggatgcccagaaggccg
gagcttaaagatttggtgcccatggagagggatgacaaacttgcccggctactggagcag
tgcagcaaggtgcaggacaggatcgacgacacactctccatatacttctga
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integrated database retrieval system