KEGG   Oryza brachyantha (malo sina): 102709963
Entry
102709963         CDS       T02995                                 
Name
(RefSeq) syndetin
  KO
K23288  syndetin
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102709963
Membrane trafficking [BR:obr04131]
 Protein recycling
  Others
   EARP complex
    102709963
SSDB
Motif
Pfam: Vps54_N Syndetin_C Topo-V_HhH_2_2nd TetR_C_30
Other DBs
NCBI-GeneID: 102709963
NCBI-ProteinID: XP_006662571
UniProt: J3N4M1
LinkDB
Position
10:14812285..14821510
AA seq 1087 aa
MRGDAPPPTASSSSSTPSLFGGGGGGDGSGELFGSAPGPLVFLPLLLIQGGGMDLSRVGE
KLLSSVRSARSLGLLPPTPSPSASRPEVPARAAAAAAAARAIAGLPPHEKISLPSNSEDL
VSIYGTNPQGQGVDELEEVFFEEEFDPIKYILQSIPEEGDSSYFDKQSTLRLAQLDKIAE
RLSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHISSSKNEVSRDLVVNVKSKK
KQALLDVLPILTELRHAQDMQMELESFVEKENYFQAFQLLPEYLQILENYSGLSAVQEMG
RGIEAWLARTIQKLDTHLLGVCQTFNDESYLTVIDAYALMGDIGGMAEKMQSFFLQEVLS
QTHFVLKEMLEEEIGNNTQRNRFTYSDLCAQVPESKLRPCLLRTLQSLFSLMCSYYTIMS
FCPGAKSIDSKDETSMTDKNSTSQSAGESLVDSGRGHAAEMSDRASSSDVSSPDTSTSGT
DSPFYQLRTDATKLVAHAFERGRRNLWQLATSRLSVLLSSSVVFSTSTYQFLKNYEDLTI
FILAGEAFCGFEASEFRQKLKGICLNYVVTFHRQNIYALKMVLERESWTIMSAEASQIIS
LAGLTGDGAALISPTCRSSALPIHYRGHSTLADAGKQKDGFASWIKIDNPFFYKLENGTT
ESPKSNLMFNSSVGNSSAHGRTNNGNGNNAPLDEENEDLLADFIDEDSQLPSRLAKTKIV
KGNSPHWKDGDILSQTGSSLSLLRMMDKYARLMQKLEIINVELFKGITQLFGIFYHCIYE
TFGNQDRGQSGRSLPDHQSFRLKAALSKITQDSDQWIKPQNISYSPSSPLSMNSTFAQMD
VMPTAPPSSMFTSYGLKERCAAAETISLVARVLNRSRAHLHSVLSQSNTSILEEFFGTMV
DSVPDLAEHIHRTSARMLLHINGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRL
DHGGISKELQDLLLEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSA
NVKPKLQIVDAFIKAYYLPETEYVHWARSHPEYSRSQVVGLVNLVATMKGWKRKARLETI
ERIEAGP
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgcggggcgacgcgccgccgcccaccgcctcctcctcttcgtcaaccccctcgctcttc
ggcggcggcggcggcggcgacggcagcggcgagctgttcgggtcggcgccggggccgctc
gtcttcctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggggag
aagctcctcagctccgtgcgctccgcgcgctcccttggcctcctccctcccaccccgtcg
ccctccgcttcccgccccgaggttccagctagagctgctgcggcggcagcggccgcgcgt
gcgatcgcagggttgccgccgcacgagaagatcagcctgccatcgaattcggaggacttg
gtgtccatctatgggaccaacccacaggggcagggcgtggatgagctcgaggaggtgttc
ttcgaggaggagttcgatccaataaagtacattctgcaaagcatccctgaagagggtgat
tccagctatttcgataagcagtctactctgagattagcgcaactcgacaaaattgcagaa
cgattatcacaccatgttatgggtcaccatgaagaaatggtgaaggggatgcagttagtg
atggagttagaacaagacttgaaggtcgcaaatgtgatctgcatgaatggacggaggcat
atatcctcttcaaagaatgaggtatcaagggatctggttgtcaatgtaaaatcaaagaag
aaacaagctttgctggatgttcttcctattcttacagaacttcgtcatgcacaagacatg
cagatggaacttgaaagttttgttgagaaagaaaactattttcaggcgtttcaattatta
cctgagtatttgcaaattttggagaactattcaggcctttctgctgtacaagaaatgggg
cgtgggattgaggcatggctggcacgaacaatccaaaaattagacacccatttactgggt
gtttgtcagaccttcaatgacgaaagttatctaactgttattgatgcttatgcactgatg
ggtgacattggtggtatggctgaaaagatgcagagtttctttctgcaagaagtactctct
cagactcattttgtcctgaaggaaatgttggaagaggagattggaaataatactcagaga
aatagatttacatacagtgatctttgtgctcaagttcctgagtctaaacttcggccctgc
ttattaagaacccttcagagtttgttttcgttgatgtgctcatattatactataatgagc
ttctgcccaggagcaaagagtattgattccaaggacgaaacctctatgacagacaagaac
agcacatcccagagtgcaggcgaatctttagttgattcaggtagaggtcatgcagctgaa
atgagtgacagggcatcatcttctgatgtcagcagtcctgatactagcacttcaggaaca
gactcaccattttatcagctgaggacagatgctacaaaacttgttgcacatgcatttgaa
agagggcgaagaaatctttggcaactggcaacaagccgcttatctgtattactgtcctct
tcagttgttttctcaactagcacataccaatttttgaagaactacgaagatctcaccatt
ttcatcttggctggtgaagcattttgtgggtttgaagcaagcgagtttcgacagaagttg
aagggtatctgtttgaactatgtggtgacctttcaccggcaaaatatctatgcactgaag
atggtactggaaagggaatcttggacaataatgtcagcggaagcatcccagataattagt
ttagcaggccttactggtgatggtgctgctctaatctcacctacctgtcgtagttccgcc
ttgccaatacattaccgtggacattccactctggctgatgcagggaagcaaaaagatgga
tttgcttcttggattaagattgacaacccatttttttacaagctagaaaatggcaccacg
gaatccccgaagtccaatttgatgttcaactcatcagttggcaatagttctgcccatgga
cgtactaacaatggcaatggaaataatgcacctcttgacgaagagaacgaagatctcctt
gctgatttcattgatgaagatagtcaattgcctagtaggttagcaaaaacaaaaattgtg
aaaggcaattctccccattggaaggatggggacattttatcacagacaggatcctcgctt
tctttattaaggatgatggataaatatgccagattaatgcaaaagctagaaattatcaat
gttgagctttttaagggtatcacccaattgtttggcatcttttatcactgcatatatgag
acatttgggaaccaggacaggggtcaaagcggcaggtctttacccgatcaccaatcattt
cgtcttaaagcggcattatcgaaaataacacaagactctgaccagtggatcaaaccacag
aatatttcatattcaccttcatcacccttatcaatgaattcaactttcgctcaaatggat
gtgatgccaactgcgcctcccagctcaatgttcacctcctatggtttgaaggagcgatgt
gcagctgccgaaacaatatcattggttgctcgagttttgaacagatcacgagcccatcta
cattccgttctgtctcaaagtaacacttccattcttgaagagttctttgggacaatggtt
gattctgttccagatttggctgagcacattcataggacaagtgcacggatgcttttacat
atcaatgggtatccagataagattgcaaatgccaaatgggaggtcaaggagcttggcata
gagcataatggctatgtcgatttgttattgggtgaattcaagcactacaaaacaagattg
gaccatggaggaatttccaaggagctgcaagacctcttgctggagtatggcatagagagc
atcgcggaggttttagttgaaggtctctctagggtaaaacggtgcacagatgaagggcgg
gctttgatgtcactggaccttcaggtactaattaatgggctgcagcacattgtatccgca
aatgttaagccaaagctgcaaattgtggatgctttcataaaggcttattatttgccggag
accgagtatgttcattgggcacggtctcatccagaatacagcagaagtcaggttgtcggg
ttggttaacctggttgcgaccatgaaaggatggaaacggaaagcgagattagaaaccatc
gagaggatcgaggcagggccatag

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