Oryza brachyantha (malo sina): 102709963
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Entry
102709963 CDS
T02995
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102709963
Membrane trafficking [BR:
obr04131
]
Protein recycling
Others
EARP complex
102709963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Topo-V_HhH_2_2nd
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
102709963
NCBI-ProteinID:
XP_006662571
UniProt:
J3N4M1
LinkDB
All DBs
Position
10:14812285..14821510
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AA seq
1087 aa
AA seq
DB search
MRGDAPPPTASSSSSTPSLFGGGGGGDGSGELFGSAPGPLVFLPLLLIQGGGMDLSRVGE
KLLSSVRSARSLGLLPPTPSPSASRPEVPARAAAAAAAARAIAGLPPHEKISLPSNSEDL
VSIYGTNPQGQGVDELEEVFFEEEFDPIKYILQSIPEEGDSSYFDKQSTLRLAQLDKIAE
RLSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHISSSKNEVSRDLVVNVKSKK
KQALLDVLPILTELRHAQDMQMELESFVEKENYFQAFQLLPEYLQILENYSGLSAVQEMG
RGIEAWLARTIQKLDTHLLGVCQTFNDESYLTVIDAYALMGDIGGMAEKMQSFFLQEVLS
QTHFVLKEMLEEEIGNNTQRNRFTYSDLCAQVPESKLRPCLLRTLQSLFSLMCSYYTIMS
FCPGAKSIDSKDETSMTDKNSTSQSAGESLVDSGRGHAAEMSDRASSSDVSSPDTSTSGT
DSPFYQLRTDATKLVAHAFERGRRNLWQLATSRLSVLLSSSVVFSTSTYQFLKNYEDLTI
FILAGEAFCGFEASEFRQKLKGICLNYVVTFHRQNIYALKMVLERESWTIMSAEASQIIS
LAGLTGDGAALISPTCRSSALPIHYRGHSTLADAGKQKDGFASWIKIDNPFFYKLENGTT
ESPKSNLMFNSSVGNSSAHGRTNNGNGNNAPLDEENEDLLADFIDEDSQLPSRLAKTKIV
KGNSPHWKDGDILSQTGSSLSLLRMMDKYARLMQKLEIINVELFKGITQLFGIFYHCIYE
TFGNQDRGQSGRSLPDHQSFRLKAALSKITQDSDQWIKPQNISYSPSSPLSMNSTFAQMD
VMPTAPPSSMFTSYGLKERCAAAETISLVARVLNRSRAHLHSVLSQSNTSILEEFFGTMV
DSVPDLAEHIHRTSARMLLHINGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRL
DHGGISKELQDLLLEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSA
NVKPKLQIVDAFIKAYYLPETEYVHWARSHPEYSRSQVVGLVNLVATMKGWKRKARLETI
ERIEAGP
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgacgcgccgccgcccaccgcctcctcctcttcgtcaaccccctcgctcttc
ggcggcggcggcggcggcgacggcagcggcgagctgttcgggtcggcgccggggccgctc
gtcttcctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggggag
aagctcctcagctccgtgcgctccgcgcgctcccttggcctcctccctcccaccccgtcg
ccctccgcttcccgccccgaggttccagctagagctgctgcggcggcagcggccgcgcgt
gcgatcgcagggttgccgccgcacgagaagatcagcctgccatcgaattcggaggacttg
gtgtccatctatgggaccaacccacaggggcagggcgtggatgagctcgaggaggtgttc
ttcgaggaggagttcgatccaataaagtacattctgcaaagcatccctgaagagggtgat
tccagctatttcgataagcagtctactctgagattagcgcaactcgacaaaattgcagaa
cgattatcacaccatgttatgggtcaccatgaagaaatggtgaaggggatgcagttagtg
atggagttagaacaagacttgaaggtcgcaaatgtgatctgcatgaatggacggaggcat
atatcctcttcaaagaatgaggtatcaagggatctggttgtcaatgtaaaatcaaagaag
aaacaagctttgctggatgttcttcctattcttacagaacttcgtcatgcacaagacatg
cagatggaacttgaaagttttgttgagaaagaaaactattttcaggcgtttcaattatta
cctgagtatttgcaaattttggagaactattcaggcctttctgctgtacaagaaatgggg
cgtgggattgaggcatggctggcacgaacaatccaaaaattagacacccatttactgggt
gtttgtcagaccttcaatgacgaaagttatctaactgttattgatgcttatgcactgatg
ggtgacattggtggtatggctgaaaagatgcagagtttctttctgcaagaagtactctct
cagactcattttgtcctgaaggaaatgttggaagaggagattggaaataatactcagaga
aatagatttacatacagtgatctttgtgctcaagttcctgagtctaaacttcggccctgc
ttattaagaacccttcagagtttgttttcgttgatgtgctcatattatactataatgagc
ttctgcccaggagcaaagagtattgattccaaggacgaaacctctatgacagacaagaac
agcacatcccagagtgcaggcgaatctttagttgattcaggtagaggtcatgcagctgaa
atgagtgacagggcatcatcttctgatgtcagcagtcctgatactagcacttcaggaaca
gactcaccattttatcagctgaggacagatgctacaaaacttgttgcacatgcatttgaa
agagggcgaagaaatctttggcaactggcaacaagccgcttatctgtattactgtcctct
tcagttgttttctcaactagcacataccaatttttgaagaactacgaagatctcaccatt
ttcatcttggctggtgaagcattttgtgggtttgaagcaagcgagtttcgacagaagttg
aagggtatctgtttgaactatgtggtgacctttcaccggcaaaatatctatgcactgaag
atggtactggaaagggaatcttggacaataatgtcagcggaagcatcccagataattagt
ttagcaggccttactggtgatggtgctgctctaatctcacctacctgtcgtagttccgcc
ttgccaatacattaccgtggacattccactctggctgatgcagggaagcaaaaagatgga
tttgcttcttggattaagattgacaacccatttttttacaagctagaaaatggcaccacg
gaatccccgaagtccaatttgatgttcaactcatcagttggcaatagttctgcccatgga
cgtactaacaatggcaatggaaataatgcacctcttgacgaagagaacgaagatctcctt
gctgatttcattgatgaagatagtcaattgcctagtaggttagcaaaaacaaaaattgtg
aaaggcaattctccccattggaaggatggggacattttatcacagacaggatcctcgctt
tctttattaaggatgatggataaatatgccagattaatgcaaaagctagaaattatcaat
gttgagctttttaagggtatcacccaattgtttggcatcttttatcactgcatatatgag
acatttgggaaccaggacaggggtcaaagcggcaggtctttacccgatcaccaatcattt
cgtcttaaagcggcattatcgaaaataacacaagactctgaccagtggatcaaaccacag
aatatttcatattcaccttcatcacccttatcaatgaattcaactttcgctcaaatggat
gtgatgccaactgcgcctcccagctcaatgttcacctcctatggtttgaaggagcgatgt
gcagctgccgaaacaatatcattggttgctcgagttttgaacagatcacgagcccatcta
cattccgttctgtctcaaagtaacacttccattcttgaagagttctttgggacaatggtt
gattctgttccagatttggctgagcacattcataggacaagtgcacggatgcttttacat
atcaatgggtatccagataagattgcaaatgccaaatgggaggtcaaggagcttggcata
gagcataatggctatgtcgatttgttattgggtgaattcaagcactacaaaacaagattg
gaccatggaggaatttccaaggagctgcaagacctcttgctggagtatggcatagagagc
atcgcggaggttttagttgaaggtctctctagggtaaaacggtgcacagatgaagggcgg
gctttgatgtcactggaccttcaggtactaattaatgggctgcagcacattgtatccgca
aatgttaagccaaagctgcaaattgtggatgctttcataaaggcttattatttgccggag
accgagtatgttcattgggcacggtctcatccagaatacagcagaagtcaggttgtcggg
ttggttaacctggttgcgaccatgaaaggatggaaacggaaagcgagattagaaaccatc
gagaggatcgaggcagggccatag
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integrated database retrieval system