Oryza brachyantha (malo sina): 102710113
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Entry
102710113 CDS
T02995
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102710113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102710113
Membrane trafficking [BR:
obr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102710113
Hops complex
102710113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
102710113
NCBI-ProteinID:
XP_006652209
UniProt:
J3LX72
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All DBs
Position
4:8514478..8519778
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AA seq
951 aa
AA seq
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MYQWRKFEFFEEKAAGRGVPGEIAARVSCCSGGRGRVAVGCDDGTVGLLDRGFRLSYGFQ
AYASSVLFLQQLKQRNVLITVGDDDQPSSQSSAICLKVFDLDKVQEEGSSTTSPFCVQIL
RIFTKQFPQAKITSFVVLEEAPPILLIAIGLDNGSIYCIKGDIARERITRFMLQVEAARD
GISSPITGLGFRLEGQAHQLFAVTPNSITLFSLHDHPPRRQTLDQIGCETNAVAMSDRMD
LIIGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRSRKNTLNVYDLKNRL
IAHSMPVGDVSHLVSEWGYIILIMSDKKILCIGEKDMESKLDMLFKKNLYTVAINLVQSQ
QADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDAKRIYNLTNYL
EKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAIRVCRAAGYH
EHAMFVAKKAGRHELYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAE
TVEILLRLCTDGGDPMTRRGSNSMRLLMIPSPMDFVNIFVHSPKYLMEFLENYTKAVKDS
PAQTEIHNTLLELYISKDLSFPSMSQENGFEEHNIKETKGKEVANGYKSGSREKGNLGKE
DMHISQDIVDRQSKGLALLKSAWTSDMEDPLYDFDLALIICNANAFKDGLLFLYEKLKLY
KEVISCYKQAHDHEGLIACCKKLGDSSQGGDPSLWGDLLKYFSELGEDCSKEVKEVLTYI
EKEDVLPPIVVLETLSKNPCLTLSVVKDYIARKLEQESKLIEEDRKSIDKYQDETELMKR
EIEDLKTNAKVFQLSKCTTCTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSVM
EAKQKLEHNARDHDLFFRQLRGSKDGFSVVADYFSKGIVSKTAIPPENGRS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcgcaagttcgagttcttcgaggagaaggcggccgggcgcggcgtgccg
ggggagatcgcggcccgggtgagctgctgctcgggcggcaggggccgcgtcgccgtcggg
tgcgacgacggcaccgtggggctcctcgaccgcgggttccgcctctcctacgggttccag
gcctacgcctcctccgtgctcttcctccagcagctcaagcaaagaaatgttcttatcacg
gttggtgatgatgatcagccatcttcacagtcatcagcaatctgtctaaaagtttttgat
cttgataaagtacaagaagaaggttcaagtacaacaagtcctttctgtgttcaaattttg
cgtatcttcactaagcaatttcctcaggcaaagattacatcttttgttgttctagaagaa
gcccctcctatactgttaattgcgattggattggataatggttccatttattgcattaaa
ggtgacatcgcacgtgagcgtattacacgatttatgttgcaagttgaggctgctagagat
ggcataagttcacctattactggtcttggtttccgactcgaagggcaagcacaccagctc
tttgctgtaactcctaattcaataaccttgttcagcttgcatgatcatccaccaaggagg
caaacgctcgatcagattggttgcgagaccaatgctgtggcgatgagtgaccgcatggat
ctgattattggtagacctgaagctgtgtatttttatgaagttgatggtagaggtccttgc
tgggcctttgatggcgagaaaaagtttgttggttggtttcggggctatttactgtgcatc
attgaagatcaaaggagccggaagaatactcttaatgtatatgatcttaagaatcggttg
attgcacatagcatgccagtgggcgacgtttcacacttggtctctgagtggggatatata
attctgataatgagtgataaaaagatcctttgcattggagagaaagacatggaaagtaag
cttgatatgttgttcaagaaaaatctgtatacagttgcaatcaatcttgtacaaagtcag
caggctgatcctgcttcaactgctgaggttctaaggaagtatggtgaccatctctatgga
aaacaggaatatgatgaggccatgtcccaatatatccacaccattggtcatcttgaacca
tcatatgttatacagaagttccttgatgcaaagcgcatctataacctcacaaactattta
gagaagttacatgatcgaggattagcatccaaagaccacaccacccttctgttgaattgc
tataccaaactgaaagatgtggaaaagcttaaccatttcatcaaagatgaagatggggta
ggtgaaatcaagtttgatgtggagactgccataagagtgtgtcgtgcagctggatatcat
gagcatgctatgtttgttgccaaaaaggctgggaggcatgagttgtatttgaagatttta
ctggaggatcttggtagatatgatgaggcactgcagtatatatctagccttgaggcaaat
caagcaggtcttactgtaaaggaatatggaaaaattcttgtggagcatagacctgctgag
acagttgagatactgttgagactctgtactgatggtggagatcctatgacaagaagaggt
tcaaatagcatgcgcttgcttatgataccttctccaatggactttgtaaacatatttgta
cacagcccaaaatatctcatggaatttctagagaattatacaaaagcagtaaaggactca
cctgctcaaacagaaattcataacacccttctggagttatatatatcaaaagatttaagt
tttccatccatgtcacaagaaaatggctttgaggagcacaatattaaggaaacaaaaggg
aaagaggttgcaaatggctataaatcaggctcaagggagaaaggaaatctgggaaaggaa
gatatgcatatctcacaggatattgttgataggcaaagtaaaggacttgcactgctgaag
tctgcatggacatctgacatggaagatcctctatatgattttgatcttgctcttataata
tgtaatgcaaatgcgttcaaagatggactgctgtttctgtatgagaaactaaaactgtac
aaagaagttattagttgctacaagcaagctcatgatcatgagggtctaattgcttgctgt
aagaagctaggagattcatctcaaggcggggatccatctctttggggtgatctgttgaaa
tattttagtgagcttggggaagattgctctaaagaggtcaaggaggtattgacctatatt
gagaaggaggatgttttgccccccattgttgtgctagagacattgtcgaaaaatccatgc
ttgacactctcagttgtcaaggattacattgcccgcaaacttgagcaagaatcaaagtta
attgaagaagataggaaatctattgataagtaccaggacgagacagaactgatgaaaagg
gagatagaggacctcaagacaaacgcaaaggtctttcagcttagcaagtgcacgacgtgc
acattcaccctcgatcttcctgcggtccacttcatgtgcatgcactccttccaccttcgc
tgcctcggggacaacgagaaagagtgcccagaatgtgctcctgaatacaggtccgtcatg
gaggcaaagcagaagctggaacacaatgccagagaccatgacctcttcttcaggcagttg
aggggttcaaaggatgggttctctgtcgtcgcagactatttcagcaagggcatagtgagt
aaaacagccattcctcctgaaaatggtcgatcataa
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