Oryza brachyantha (malo sina): 102710149
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Entry
102710149 CDS
T02995
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102710149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102710149
Spliceosome [BR:
obr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102710149
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
SF3a60_bindingd
Motif
Other DBs
NCBI-GeneID:
102710149
NCBI-ProteinID:
XP_006660614
UniProt:
J3MXB4
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Position
9:complement(8792977..8797929)
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AA seq
562 aa
AA seq
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MAAEDLSSLTRKRGREEEEEEGVVDGDGEAAEKRPRAGEEGSEGASLLGLAGYEDEEEDE
AAAGRARANGRHDEDEDEDEEEEVVVEEVDDDDDEDDVRRGPERRPRQVELRRDCPYLDT
VNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTE
KAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVQTLDRNKQWSRALDGSNYLPGMVGLNNI
KETDFVNVTIQSLMRITPLRNFFLIPENYRNSKSPLVHRFGELTRKIWHARNFKGQVSPH
EFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRRRNRSIIHDCFQGELEVVKE
FHKKHIVEKKEDSDEQNGDASSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPL
FNILKKFDGETVTEVVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVK
NLELKDYIPLPKPKDNEKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHV
TETLPQMVALSEAYMQIYEQHE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaggatctctcgtccctgacgcggaagcgcggccgcgaggaggaggaggag
gagggggtcgtcgacggcgacggggaggccgccgagaagcgcccgcgcgcgggggaggag
gggtcggagggcgcgtcgctgctggggctcgccggctacgaggacgaggaggaggacgag
gcggctgccgggagggcccgcgcgaatggccgacacgatgaagatgaagatgaagatgaa
gaggaagaggtggtggtggaggaggtggacgacgacgacgacgaggatgacgtgaggagg
ggtccggagaggaggccgaggcaggtggagttgcggcgggactgcccttacctcgacacc
gtgaatcgccaggtccttgattttgattttgagaagttctgctcaatatccttatcaaac
ctgaacgtgtatgcatgtttggtttgtggaaagtattaccaaggaagaggcttgaaatct
catgcatatacccacagccttgaagctggccaccatgtgtttattaaccttcaaactgag
aaagcatactgtcttcctgatggatatgagataaatgatccatcgttggaagatatccga
catgttctcaatccaaggttcacaacagagcaggttcaaactcttgataggaacaagcag
tggtctagagctcttgatggctccaattatctgcctggaatggttggtctaaacaacatc
aaggagacagattttgtgaatgtcacaatacagtcgctaatgagaatcactcctttaaga
aatttctttctcatccctgaaaattatcggaacagcaaatcaccattggttcatcgattt
ggagaactaactcgcaaaatctggcatgcgaggaacttcaagggccaggttagtccacac
gagttcctgcaagcagttatgaaggccagtgataaaaggttccagattggtgttcagtct
gatccagtggaatttatgtcatggctcttaaacacaatgcactcaaaactaaaaagtagg
aggagaaacagaagcatcatacatgattgctttcagggagaacttgaagttgttaaggaa
tttcacaagaagcatatagtggaaaagaaagaggacagcgatgaacagaatggtgatgca
agttcagatattgtcactgaaacatctagggttccattcttgatgctcggccttgaccta
ccacctccacctcttttcaaagatgccatggagaaaaatatcattccacaggtaccactg
tttaatatattgaagaagtttgatggtgaaacagttacagaggtagtgcggccatccatt
gctcggatgagatatcgagtcatcagacttccaaagtatctgatccttcacatgcgacgg
tttaccaaaaataacttttttgtggagaaaaatcctactctagtgaattttcctgtgaag
aacttggaattgaaagattacatcccattacctaagccaaaagataatgagaagctgcgc
tcaaagtatgatctcatcgccaacattgtccatgatggcaagccaggcgagggatgctac
agagtatttgtacagcggaaatcagaagaggcttggtatgaaatgcaagatctccatgtc
accgagactcttcctcagatggtagccctttcagaagcttacatgcaaatatatgagcaa
cacgaatga
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