Oryza brachyantha (malo sina): 102710939
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Entry
102710939 CDS
T02995
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102710939
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102710939
Meiosis-specific proteins
Cohesin complex and associated proteins
102710939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
AAA_27
SbcC_Walker_B
ABC_tran
DUF6806
Motif
Other DBs
NCBI-GeneID:
102710939
NCBI-ProteinID:
XP_006664798
LinkDB
All DBs
Position
12:complement(16911544..16929307)
Genome browser
AA seq
1219 aa
AA seq
DB search
MAAGKGGGGGRIHRLEVENFKSYKGTQTIGPFFDFTAIIGPNGAGKSNLMDAISFVLGVR
SAHLRGAQLKDLIYALDDRDKEAKGRRASVGLVYHLPGTGDELHFTRTITGAGGSEYRID
GRLVTWDDYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELRREY
DELEDQKTRAEEKSALIYQEKRTIVMERKQKKAQKEEAENHLRLQQKLKLAKTEHHLWQL
YTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSAFLKKMTLCEKSIAKKK
LELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKRLQSALVDVTRAID
ELNEQGQNKSEKLQLADDQLQEYHRIKEDAGMSTAKLRDEKEVFDKELNADVEAKKNLEE
NMQQLRNRENEILSQERELRAKLNKILHSIPRHEDELAHLREEHNKISKERQSSGVKYQM
LKQRLDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKKYNLA
VTVAMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLGGSAQ
LVFDVIQFDRALEKAVLYAVGNTLVCDELDEAKTLSWSGERYKVVTVDGILLTKSGTMTG
GISGGMAARSNKWDDSIIESWKKKKNQYESEMSELGSPRELQRKELAVSEKITGLEKKLH
YLNVEENNLREKLHRLESEKCNIEEEINRLEPVKEELETRLGKKEREVRVLEKKINEIVD
RIYKDFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQAPIM
KLKETRESLEKELKSLQERESGARAEAEQISNQMEELKAEAEDWKSKSDECETAIDELKE
KNGSVAAALAKLDRQVKSKEGKLVQLRSQERAIHEKCELEQLKLPTVDDPMDTGSSSQVP
ILDYSQLSETYLQDMRLSERDKFEAEFNKNIGVLIAEIEHTAPNLKALDQYETLQRKEKE
VMEKFEAARKEELEIADKYNSVKQRRYELFMEAFDHISKGIDQIYKELTKSQTHLLGGTA
YLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSPFFILD
EVDAALDNLNVAKVAGFIRSKSCQRVEEQNGGGCGFQSIVISLKDSFYDKAEALVGVYRD
SERCCSRTLTFDLTKYREA
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcaagggcggcggtggggggcgcatccatcggttggaagtggagaacttc
aagtcgtacaaggggacgcagacaatcgggcccttcttcgacttcacggccatcatcggt
cccaatggcgccggcaagtccaacctcatggacgccataagctttgtgcttggggttcgc
tctgcccacctccgaggcgcccagctcaaggacctcatctacgccctcgacgaccgcgat
aaggaggccaagggtcgcagggcctccgtcggcctcgtctaccacctccccggcaccggg
gatgagctccacttcacccgcacaatcaccggcgccggtggcagcgagtaccggatcgac
ggccggcttgtcacctgggacgactataacgccaagctcagatccctgggcatcctcgtc
aaggctcgcaatttcctcgtcttccagggtgatgtggaatccattgcctccaagaatccc
aaggagctcactgcacttctggagcagatctctggctctgacgagctcaggagggaatat
gacgaactggaagaccaaaagaccagggccgaagagaagtctgcacttatctatcaagag
aaaaggaccattgtcatggaaaggaagcagaaaaaggctcaaaaggaagaggcagagaat
catctacgcctccagcagaaattgaaactagccaagacagaacatcacctatggcaactc
tacacaattgagaaagatgctgagaaaatagaagctgaacttgaggaggacaggcggtct
cttcagcaagtgctggaagagaatcagtcctctgactatgagctttctgcaaaaaagaaa
gagcaaagtgcgtttctcaagaaaatgaccttatgcgagaagagtatagccaagaaaaag
cttgaactcgacaagaaacaacctgagcttcttagattgaaagaacaaatttctcggctg
aaatccaaaatcaaaagctgcaacaaagagattgacaaaaagaaggatgatagcaagaag
catttggaagagatgaaaaggttgcagagtgctttggttgatgtcacgagagctattgat
gagttgaatgagcaaggccaaaataaaagcgagaaattgcaattagctgatgaccaactc
caggaataccatagaattaaggaagatgcaggaatgagtacagcaaagctgagagacgag
aaggaagtttttgataaagagcttaatgctgatgttgaagcaaaaaagaatttagaggag
aatatgcagcagctgcgtaaccgtgagaatgagattttgtcacaagagcgtgagttgcgt
gcaaagcttaataagattcttcattcaatccccaggcatgaagatgagcttgctcactta
cgtgaggaacataacaaaatttcaaaagagcgccagtcctccggagttaaatatcaaatg
ttgaagcagaggttggatgagatagatacaaaattacgagagctcaaggctgacaagcat
gagagtgagcgggatgctcgattttcggaaacagttaggagtctaaagcgactattccct
ggagtccatggtcgcatgacagaactttgtaggccttcacagaagaaatacaacctcgct
gtcactgttgctatggggaaattcatggatgcagtggtggtagaagatgagaacacagga
aaagaatgcattaagtacttgaaggagcagcgccttcctcctcagacatttattccctta
caatcagtccgcgtgaagcctataattgagaagctgcgaacacttgggggatctgcgcag
ttggtctttgatgttattcaatttgaccgagctttggagaaagcagttctgtatgctgtt
ggaaatacgcttgtctgtgatgaacttgatgaagcaaaaaccttaagttggagtggtgaa
aggtacaaggttgttaccgtcgatgggattcttctgactaaatcgggcacaatgactggt
ggaataagtggtggaatggcagctagatcgaataaatgggacgacagcataatagaatct
tggaagaagaagaaaaatcagtatgaatctgaaatgtctgaacttgggtcccccagggag
ttacagagaaaggagcttgctgtgtctgagaaaataactggacttgagaaaaagctacat
tacttgaatgttgaagagaataatctcagagagaagctacacagattggaatctgagaag
tgtaatattgaggaagagatcaatcgtcttgaaccagtaaaggaggagttggagactcgt
ctgggtaaaaaggaacgggaagtaagagttcttgaaaagaaaataaatgagattgtggac
cgtatttacaaagattttagcaagtcagttggtgtgaagaacatccgtgaatatgaagag
aggcaactaaaagatgctcaagcactgcaggagaggaagctaagcttgagtaatcagatg
tccaaattgaaataccagctggaatatgaacaaaaacgagatatgcaggcaccaattatg
aagttaaaggagacacgcgagtccctagagaaggagcttaagagtttacaggagagagag
tctggagctagggctgaagcagagcaaatttcaaatcagatggaagagctgaaagctgag
gctgaagactggaaatccaagtctgatgaatgtgaaacagctatcgatgaactgaaggag
aagaatggtagtgttgctgcggccttggcgaagctggatcgccaagtgaagtcaaaggag
gggaagcttgtgcaacttagatcacaggaacgggcgattcatgagaaatgtgaactggag
caactgaagcttcctacagttgatgatccaatggatactggatcatcttcacaagtaccg
atccttgactacagtcagcttagcgaaacctacctgcaggatatgcggctttctgaacgt
gacaaatttgaggcagagtttaacaaaaatataggggttctaattgctgagattgagcac
actgccccaaacctgaaagcgctagaccaatatgaaacattgcaaaggaaggaaaaggag
gttatggaaaagtttgaagcagcaagaaaagaagagctggagatagctgacaagtataat
tctgtcaagcaacgaaggtatgagctgttcatggaagcctttgatcacatatctaaaggc
atagaccaaatttataaggagttaacgaaaagtcaaacacatctacttggaggaactgca
tatttaaatctagaaaatgaagatgagccatttctacatggaatcaagtacacagctatg
cctcctacaaagcgctttagagatatggaacagttatctggtggtgagaagaccgttgct
gccctggcattgctttttgccattcacagtttcaggccatccccgttcttcatattggat
gaagtcgatgctgctctggataatttaaatgttgccaaagttgctgggtttatcagatca
aagtcatgccaacgtgttgaagaacaaaacggtggaggatgtggatttcagagcatcgtt
atatcgctgaaggacagtttctatgacaaagctgaagcactggttggtgtttatagggac
tcagaacgatgttgctcaaggacccttaccttcgacctgacgaagtatagagaagcatga
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