Oryza brachyantha (malo sina): 102711224
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Entry
102711224 CDS
T02995
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03015
mRNA surveillance pathway
obr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102711224
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102711224
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obr01009
]
102711224
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102711224
03036 Chromosome and associated proteins [BR:
obr03036
]
102711224
Protein phosphatases and associated proteins [BR:
obr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
102711224
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
102711224
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
102711224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
102711224
NCBI-ProteinID:
XP_040376439
LinkDB
All DBs
Position
2:complement(18167727..18170869)
Genome browser
AA seq
550 aa
AA seq
DB search
MSNSGRRRRSPNSIAPSPVSCSSSPPGSQEAQAPSQLPSWKFSQVLGELPLAAAAAGGGG
AGHDSGTLQLQDDGDTVSAIEFDGQGEHLAAGDHAGRVILFRRTDESDEPPPSRAELERT
DYAAAAAAPAYSYMAEFQSHEQEFDVLHSLEIGEKVKKLRWCARPNSSSLCMLTTNDRTV
KLWKVSEHRWRKGDGQPRRRRSTPASLSEIAPLGGDDSGVRNGYYHECASKKARSYLSPD
STEHSDKAGEVGEGYSAKCRRVFARAHEYNINSLSNNCDGETFVSADDLRINLWHLEVTG
QCFNIVDMKPADMEDLVEVITSAEFHPSSCSLLAYGSSRGFVRLVDLRRSALCDGNVRIF
QDRENSTQPRTLFTEIISCISDVKFTGDGKHLLSRDYMNLKLWDLRVESSPVATYKVHEF
LRPKLSELYNNDSIFDRFSCCCSKGGDHFATGSYSNTFRVFSRGAANRNGITLEASTNPY
RIRSFAPAKSSGLLSSFARGIQRKGQDGPRSDGREDTQCDMESKVTHLACHPTENFLVCA
ANYSLYMYHT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactccggcaggaggaggaggagcccgaactccatagctccttcccctgtctcc
tgctcttcctcccctcccggttcgcaggaagctcaggcaccgtcacagcttcccagctgg
aagttctcccaggtgctcggcgaactgccgcttgccgccgccgccgccggcggcggcggt
gcaggccacgacagcggcactctccagctccaggacgatggtgatacggtctcggccatc
gagttcgacggtcagggcgagcacctggccgccggcgaccacgctgggcgcgtcatcctc
ttccggagaaccgacgagagcgacgagccgccgccgtctcgtgcggagctggagcggacg
gactacgccgccgcggcggcggcgccggcgtacagctacatggcggagttccagagccac
gagcaggagttcgacgtgctgcacagcttggagatcggcgagaaggtgaagaagctgaga
tggtgcgcgcggccgaacagctcgtcgctgtgcatgctcaccaccaacgaccgcaccgtc
aaactctggaaggtctccgaacacaggtggaggaaaggggacggccagccgcggcggcga
cggagcactccggcgtcgctgtcggagatcgcgccgctcgggggagacgattccggcgtg
agaaatgggtactatcacgagtgcgcaagcaagaaggctaggagctatctgtccccggat
tccaccgaacattctgacaaggcaggcgaggttggagaagggtactccgcgaaatgccgg
agagtgttcgctcgtgctcatgagtacaacatcaactctctctcaaacaactgtgacggg
gagacgttcgtgtcggccgacgatctgaggatcaacctgtggcacctggaggtgacaggc
cagtgcttcaacatcgtggacatgaagcccgcggacatggaggatctcgtagaggtgatc
acttcggcagagttccacccgtcgtcgtgcagcctcctcgcctacggcagctcgaggggc
ttcgtccggctggtcgacctccggcggtcggcgctgtgcgacggcaacgtcagaatattc
caagatcgcgagaacagcacgcagcctaggacactcttcactgagatcatctcttgcatc
tccgacgtgaagttcactggagatgggaagcatcttctaagtcgtgactacatgaacctg
aagctctgggacttgcgcgtcgagagctcccctgttgcaacttacaaggtgcatgagttc
cttcgtcctaagctgtcagaactgtacaacaacgacagcatattcgacaggttcagctgc
tgctgcagcaagggaggggaccacttcgccactggatcttacagtaatacattcagagtt
ttctcgcgtggtgctgcaaatcgcaacggaattacgttggaagctagcacgaacccttac
aggatacgatcgttcgcccctgcaaagagctcaggtctgctcagcagttttgctcgcgga
atccagagaaaaggtcaagatggaccaagatctgacggccgggaggacacccaatgtgac
atggaatcaaaggtgacgcatctagcttgccacccgacagaaaacttcctggtttgtgca
gccaattacagcttgtacatgtatcatacatag
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integrated database retrieval system
