Oryza brachyantha (malo sina): 102711357
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Entry
102711357 CDS
T02995
Name
(RefSeq) homeobox-leucine zipper protein ROC8
KO
K09338
homeobox-leucine zipper protein
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102711357
Transcription factors [BR:
obr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
102711357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102711357
NCBI-ProteinID:
XP_040380704
LinkDB
All DBs
Position
6:complement(3909051..3913433)
Genome browser
AA seq
705 aa
AA seq
DB search
MDFGDEPEGSDSQRRRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIK
FWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDE
QKLRMENARLKEELDRVSNLTSKYLGRPFTQLPPATPMSVSSLDLSVGGMSGPGLGGPSL
DLDLLSGGSSGIPFQLPAPVSDMERPMMADMATRAMDELIRLAQAGDHIWSKSPGGGVSG
GDSRETLNVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALADVFMDTNKWMEFF
PSIVSKAHTIDVLVNGMGGRSESLILMYEELHIMTPAVPTREVSFVRYCRQIEQGLWAIA
DVSVDLQRDAHFGAPPPRSRRLPSGCLIADMANGYSKVTWVEHMEVEEKNPINVLYRDLV
LSGAAFGAHRWLAALQRACERYASLVALGVPHHIAGVTPEGKRSMMKLSQRMVNSFCSSL
GASQMHQWTTLSGSNEVSVRVTMHRSTDPGQPNGVVLSAATSIWLPVPCDHVFAFVRDEN
TRSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLRGLNASQNSMLILQESCTDASGSLVVY
SPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGRPGSAAGASSSSAGPVAAPRGGSVVTV
AFQILVSSLPSSKLNAESVATVNGLITTTVEQIKAALNCSAHGHP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggcgacgaacctgagggctccgacagccagcgccgccgcaagcgctaccac
cgccacacccctcgccagattcagcagctcgaggcgatgttcaaggagtgcccccacccc
gacgagaaccagcgggcgcagcttagccgggagctcggcctggagccgaggcagatcaag
ttctggttccagaaccgccggacccagatgaaggcgcagcacgagcgggcggacaactgc
ttcctccgcgcggagaacgacaagatccggtgcgagaacatcgccatccgcgaggcgctc
aagaacgtcatctgccccacctgcggcggccctcccgtcggcgaggattacttcgacgag
cagaagcttcgcatggagaacgcccgtctgaaggaagagctcgaccgcgtgtcgaacctc
acgtccaagtacctcggccggccgttcacgcagctcccaccggcgacgccgatgtccgtc
tcgtcgttggacctctccgtgggcgggatgagcgggcccgggctgggcggcccatcgctc
gacctggacctcctcagcgggggctcgtcggggatcccgttccagctgccggcgcccgtg
tcggacatggagcgccccatgatggcggacatggccacacgcgccatggacgagctgatc
cgcctcgctcaggcgggcgaccacatctggtccaagagccccggcggcggcgtgtccggc
ggcgactcccgcgagacgctcaacgtcgacacctacgacagcatcttctccaagcccggc
ggctcgtaccgcgcgcccagcatcaacgtcgaggggtcccgcgagtccggcctcgtgctc
atgagcgccgtcgctctcgccgacgtgttcatggacacgaacaaatggatggagttcttc
cctagcatcgtgtccaaagctcacaccattgatgtccttgtgaatggcatgggtgggaga
agcgagtccttgattctgatgtacgaggagctgcacatcatgacgccggccgtgccgact
cgggaggtgagcttcgtccgctactgccggcagatcgagcaggggctgtgggccatcgcc
gacgtctccgtcgacctgcagcgtgacgcccacttcggcgcgccgccgccgcgctcccgc
cgtctcccgtcggggtgcctcatcgccgacatggccaatggctactccaaggtgacctgg
gtcgaacacatggaggtggaggagaagaacccaatcaacgtgctctaccgcgacctcgtg
ctcagcggcgccgcgttcggggcgcaccgctggctcgccgcgctccagcgcgcgtgcgag
cgctacgcctccctcgtcgcgctcggcgtcccgcaccacatcgccggagtgacgccggag
gggaagaggagcatgatgaagctgtcgcagcgcatggtgaacagcttctgctcgagcctg
ggcgcgtcgcagatgcaccagtggacgacgctgtcggggtccaacgaggtgagcgtccgc
gtcaccatgcaccggagcaccgaccccggccagcccaacggcgtcgtcctcagcgccgcc
acctccatctggctccccgtcccctgcgaccacgtcttcgccttcgtccgcgacgagaac
acccgctcccagtgggacgtcctgtcgcacggcaatcaagtccaggaagtgtcgcgcatc
cccaacggctccaaccccggcaactgcatctccctcctaagaggcttgaatgcgagccag
aacagcatgctgatcctgcaggagagctgcacggacgcgtcggggtcgctggtggtgtac
tcgccgatcgacatcccggcggcgaacgtggtgatgagcggcgaggacccgtcgagcatc
ccgctgctgccgtcggggttcaccatcctccccgacggccgcccggggtcggcggcgggg
gcgtccagcagtagcgccggcccggtcgccgccccgcgcggcggctccgtcgtcaccgtc
gcgttccagatcctcgtgagcagcctcccgtcgtccaagctcaacgccgagtccgtcgcc
accgtcaacggcctcatcaccaccaccgtggagcagatcaaggccgcgctcaactgctcc
gcccatggccacccctga
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