Oryza brachyantha (malo sina): 102711436
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Entry
102711436 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102711436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102711436
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102711436
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102711436
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
102711436
NCBI-ProteinID:
XP_006655126
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All DBs
Position
5:5804813..5811023
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AA seq
353 aa
AA seq
DB search
MDMDSVECLSLPDSSMDVDDVDGGGHHHGGHHHGLPPHPAHLPAVAVAVGPGRAFPKVNV
AGVVGAAGGVVTGGGGAAGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV
HNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNC
PYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFG
QYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSH
RKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtggagtgcctctccctccccgactcgtccatggacgtggacgac
gtcgacggcggcggccaccaccacggagggcaccaccacggcctcccgccccaccccgcg
cacctccccgccgtcgccgtcgccgtcggcccggggcgcgcgtttcccaaggtgaacgtc
gcgggggtggtgggcgcggcgggaggtgtggtcacgggcggtgggggagccgccggcggc
ccgccggccaccagcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgttc
ccgcccattcaccagtgccaaaatggacacactttatgttcaacatgcaaagctagagtg
cacaaccggtgccctacctgcagacaagagctcggtgatattaggtgcttggcacttgag
aaagtagcagaatcactcgaacttccctgcaaatactgctctttaggttgcccagaaatt
tttccatactacagcaaaataaagcatgaagcacagtgcagcttcaggccatataactgc
ccttatgctggttctgaatgtgctgtggctggtgacattcctttccttgttgcacatttg
agggatgatcacaaagttgatatgcatagtggttgcacattcaaccacagatatgtcaaa
tctaatccacgcgaggttgagaatgcaacctggatgctaacagtgttccactgtttcggg
cagtatttctgcctgcattttgaggccttccagcttggaatggcaccagtctatatggcc
ttcctccgtttcatgggggatgagaacgaagcaagaaactatacatacagccttgaggtc
ggtggcaacggcaggaagatggtatgggaaggcacccctaggagcatccgtgacagccac
cggaaggtccgggacagccatgacggcctcatcatccagagaaacatggcgctgttcttc
tccgggggcgacaggaaggagctgaagctgcgggtaaccggccggatctggaaagagcag
acgaacccggatggggcctgcataccgaacctttgtagctga
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